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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 208 46

  3. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 99 91

  4. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 94 38

  5. task-execution-schemas task-execution-schemas Public

    92 30

  6. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 91 31

Repositories

Showing 10 of 138 repositories
  • ga4gh-starter-kit-common Public

    Common utils library for GA4GH Starter Kit web services

    ga4gh/ga4gh-starter-kit-common’s past year of commit activity
    Java 1 Apache-2.0 2 6 2 Updated Dec 16, 2025
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python’s past year of commit activity
    Python 61 Apache-2.0 37 64 (1 issue needs help) 9 Updated Dec 15, 2025
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec’s past year of commit activity
    Jupyter Notebook 25 Apache-2.0 6 111 (1 issue needs help) 3 Updated Dec 10, 2025
  • gks.github.io Public

    The landing page for getting started with GA4GH Genomic Knowledge Standards

    ga4gh/gks.github.io’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Dec 10, 2025
  • analytics-dashboard Public

    Embedded analytics dashboard on GA4GH metrics

    ga4gh/analytics-dashboard’s past year of commit activity
    Jupyter Notebook 1 0 4 5 Updated Dec 9, 2025
  • workflow-execution-service-schemas Public

    The WES API is a standard way to run and manage portable workflows.

    ga4gh/workflow-execution-service-schemas’s past year of commit activity
    86 Apache-2.0 37 57 4 Updated Dec 9, 2025
  • vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    ga4gh/vrs’s past year of commit activity
    Jupyter Notebook 94 Apache-2.0 38 30 (2 issues need help) 3 Updated Dec 9, 2025
  • gks-core Public

    Common classes and schemas used by all GKS specifications (ie. VR, VA, etc..)

    ga4gh/gks-core’s past year of commit activity
    Python 2 Apache-2.0 0 8 0 Updated Dec 8, 2025
  • cat-vrs Public

    A terminology and data model for describing categorical variation concepts.

    ga4gh/cat-vrs’s past year of commit activity
    Makefile 4 Apache-2.0 4 20 1 Updated Dec 8, 2025
  • connect-2025-hackathon Public

    April Connect 2025 hackathon session

    ga4gh/connect-2025-hackathon’s past year of commit activity
    Python 0 Apache-2.0 0 0 2 Updated Dec 6, 2025
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