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Fix grammer in NEWs file
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c-mertes committed Nov 21, 2022
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Expand Up @@ -12,7 +12,7 @@ The manuscript is available in [Nature Protocols](https://www.nature.com/article

## What's new

`Snakemake v.7.8` introduced some changes in which changes in parameters can cause rules to be executed. More info [here](https://github.com/snakemake/snakemake/issues/1694). This affects DROP and causes certain rules in the AS and QC modules to be triggered even if they were already completed and there were no changes in the sample annotation or scripts. The workaround is to run DROP adding the parameter `--rerun-triggers mtime`, e.g. `snakemake -n --rerun-triggers mtime` or `snakemake --cores 10 --rerun-triggers mtime`. We will investigate the rules in DROP to fix this.
`Snakemake v.7.8` introduced some changes in which changes in parameters can cause rules to be re-executed. More info [here](https://github.com/snakemake/snakemake/issues/1694). This affects DROP and causes certain rules in the AS and QC modules to be triggered even if they were already completed and there were no changes in the sample annotation or scripts. The workaround is to run DROP by adding the parameter `--rerun-triggers mtime`, e.g. `snakemake -n --rerun-triggers mtime` or `snakemake --cores 10 --rerun-triggers mtime`. We will investigate the rules in DROP to fix this.

Version 1.2.2 fixes some critical bugs that affected the performance of the `aberrantExpression` pipeline, and allows sample IDs to be numeric.

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