update install instructions for fixed conda env

gagneurlab · Nov 7, 2022 · bf38887 · bf38887
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diff --git a/README.md b/README.md
@@ -24,6 +24,11 @@ We recommend using a dedicated conda environment. (installation time: ~ 10min)
 mamba create -n drop_env -c conda-forge -c bioconda drop --override-channels
 ```
 
+In the case of mamba/conda troubles we recommend using the fixed `DROP.yaml` installation file we make available on our [public server](https://www.cmm.in.tum.de/public/paper/drop_analysis/DROP.yaml). Install this using the following command:
+```
+mamba env create -f DROP.yaml
+```
+
 Test installation with demo project
 ```
 mkdir ~/drop_demo

diff --git a/docs/source/installation.rst b/docs/source/installation.rst
@@ -16,6 +16,12 @@ For installing, use `mamba` instead of `conda` as it provides more reliable and
 
     mamba create -n drop_env -c conda-forge -c bioconda drop --override-channels
 
+In the case of mamba/conda troubles we recommend using the fixed `DROP.yaml` installation file
+we make available on our [public server](https://www.cmm.in.tum.de/public/paper/drop_analysis/DROP.yaml).
+Install this using the following command:
+.. code-block:: bash
+    mamba env create -f DROP.yaml
+
 Installation time: ~ 10min
 
 Test whether the pipeline runs through by setting up the demo dataset in an empty directory (e.g. ``~/drop_demo``).