Bump version number, history.rst and rebuild docs

HISTORY.rst

@@ -5,6 +5,19 @@ History
 
 .. to_doc
 
+---------------------
+0.75.2 (2022-11-02)
+---------------------
+
+* Compare versions, not tool ids to find latest tool ids (thanks to
+  `@mvdbeek`_). `Pull Request 1313`_
+* Fix ``for_paths`` when path is directory of tools (thanks to `@mvdbeek`_).
+  `Pull Request 1312`_
+* Fix workflow_lint with list + check elements in collection (thanks to
+  `@lldelisle`_). `Pull Request 1310`_
+* Drop copy_tree workaround for tool sources (thanks to `@mvdbeek`_). `Pull
+  Request 1308`_
+
 ---------------------
 0.75.1 (2022-10-31)
 ---------------------
@@ -1885,6 +1898,10 @@ History
   tools - and more experimental features involving Docker and Homebrew. 7d07782_
 
 .. github_links
+.. _Pull Request 1313: https://github.com/galaxyproject/planemo/pull/1313
+.. _Pull Request 1312: https://github.com/galaxyproject/planemo/pull/1312
+.. _Pull Request 1310: https://github.com/galaxyproject/planemo/pull/1310
+.. _Pull Request 1308: https://github.com/galaxyproject/planemo/pull/1308
 .. _Pull Request 1302: https://github.com/galaxyproject/planemo/pull/1302
 .. _Pull Request 1303: https://github.com/galaxyproject/planemo/pull/1303
 .. _Pull Request 1304: https://github.com/galaxyproject/planemo/pull/1304

docs/commands/ci_setup.rst

@@ -0,0 +1,75 @@
+
+``ci_setup`` command
+======================================
+
+This section is auto-generated from the help text for the planemo command
+``ci_setup``. This help message can be generated with ``planemo ci_setup
+--help``.
+
+**Usage**::
+
+    planemo ci_setup [OPTIONS]
+
+**Help**
+
+
+Launch Galaxy instance, then terminate instance.
+
+Useful for populating a CI cache.
+
+**Options**::
+
+
+      --galaxy_root DIRECTORY         Root of development galaxy directory to
+                                      execute command with.
+      --galaxy_python_version [3|3.7|3.8|3.9]
+                                      Python version to start Galaxy under
+      --extra_tools PATH              Extra tool sources to include in Galaxy's tool
+                                      panel (file or directory). These will not be
+                                      linted/tested/etc... but they will be
+                                      available to workflows and for interactive
+                                      use.
+      --install_galaxy                Download and configure a disposable copy of
+                                      Galaxy from github.
+      --galaxy_branch TEXT            Branch of Galaxy to target (defaults to
+                                      master) if a Galaxy root isn't specified.
+      --galaxy_source TEXT            Git source of Galaxy to target (defaults to
+                                      the official galaxyproject github source if a
+                                      Galaxy root isn't specified.
+      --skip_venv                     Do not create or source a virtualenv
+                                      environment for Galaxy, this should be used to
+                                      preserve an externally configured virtual
+                                      environment or conda environment.
+      --no_cache_galaxy               Skip caching of Galaxy source and dependencies
+                                      obtained with --install_galaxy. Not caching
+                                      this results in faster downloads (no git) - so
+                                      is better on throw away instances such with
+                                      TravisCI.
+      --no_cleanup                    Do not cleanup temp files created for and by
+                                      Galaxy.
+      --galaxy_email TEXT             E-mail address to use when launching single-
+                                      user Galaxy server.
+      --docker / --no_docker          Run Galaxy tools in Docker if enabled.
+      --docker_cmd TEXT               Command used to launch docker (defaults to
+                                      docker).
+      --docker_sudo / --no_docker_sudo
+                                      Flag to use sudo when running docker.
+      --docker_host TEXT              Docker host to target when executing docker
+                                      commands (defaults to localhost).
+      --docker_sudo_cmd TEXT          sudo command to use when --docker_sudo is
+                                      enabled (defaults to sudo).
+      --mulled_containers, --biocontainers
+                                      Test tools against mulled containers (forces
+                                      --docker). Disables conda resolution unless
+                                      any conda option has been set explicitly.
+      --galaxy_startup_timeout INTEGER RANGE
+                                      Wait for galaxy to start before assuming
+                                      Galaxy did not start.  [x>=1]
+      --job_config_file FILE          Job configuration file for Galaxy to target.
+      --tool_dependency_dir DIRECTORY
+                                      Tool dependency dir for Galaxy to target.
+      --tool_data_path DIRECTORY      Directory where data used by tools is located.
+                                      Required if tests are run in docker and should
+                                      make use of external reference data.
+      --help                          Show this message and exit.
+    

docs/commands/test.rst

@@ -12,7 +12,7 @@ This section is auto-generated from the help text for the planemo command
 
 **Help**
 
-Run specified tool's tests within Galaxy.
+Run specified tool or workflow tests within Galaxy.
 
 All referenced tools (by default all the tools in the current working
 directory) will be tested and the results quickly summarized.

planemo/__init__.py

@@ -1,4 +1,4 @@
-__version__ = "0.75.1"
+__version__ = "0.75.2"
 
 
 PROJECT_NAME = "planemo"