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GalaxyP Training material

topic features
Database Handling 📖
Peptide and Protein ID 📖
Protein Quantitation by Stable Isotope Labelling (SIL) 📖
Label-free versus Labelled - How to Choose Your Quantitation Method 📖
Metaproteomics 📖
metaQuantome Data creation 📖
RNA-seq Database creation 📖
Proteogenomics Database searching 📖
Proteogenomics Novel Peptide Analysis 📖
metaQuantome-Taxonomy 📖
metaQuantome-Function 📖
EncyclopeDIA 📖

The Galaxy community offers many different ways of training. The table above lists all available training features of a specific topic to give you a fast and comprehensive overview.

  • 🐳 The training course and material is available as Docker container.
  • 🎥 The training course is available as video on our vimeo page.
  • 👀 The training course is available as Galaxy tour
  • 📄 The training course and material is available as Galaxy page (👍 hands-on training).
  • 📖 The training course and material is available as annotated text (👍 hands-on training).
  • 🎓 Slides as Introduction

Workflows

The GalaxyP GTN project also offers a selection of published GalaxyP workflows. The presented workflows are adapted to specific questions in proteomics, which are not answered in the more basic tutorials. You are free to use and modify all workflows for your scientific question.

topic features
N-Tails 📄 📖
Secretome Prediction 📄 📖

Disclaimer

Thanks for your interest in the GTN GalaxyP training material project. We only recently started working on this repository. We try to integrate more and more topics over time. Keep an eye out for new material from time to time.

If you want to join the discussion about new material to integrate, please post your thoughts here. We are most thankful for any feedback!