anywave_hed

An AnyWave plugin to place HED tags into the BIDS format

Description

This plugin converts AnyWave's native .mrk files to BIDS _events.tsv files after closing the program.

How to Install

A Python plugin is a folder located in the user home dir.

• Windows: Documents\AnyWave\Plugins\Python
• Linux: /home/username/AnyWave/Plugins/Python
• MacOS: /users/username/AnyWave/Plugins/Python

Once added to the correct folder, the plugin will show up under the Processes/Markers/Save as HED Tags in BIDS.

Creating and Linking a Virtual Environment

1. Create the virtual environment

Python3 -m venv  c:\dev\venv\anywave

2. Activate the virtual environment

c:\dev\venv\anywave\Scripts\activate

3. Install the AnyWave Plugin API to the environment

pip install anywave-plugin-api

4. Link the virtual environment in the AnyWave preferences

Key Features

• The plugin will automatically sync the _events.tsv file to the .mrk file in the associated derivatives/anywave folder.
• The plugin will find automated artifact annotations (.artf) next to the EEG-BIDS .edf file and add them to both the .mrk and the _events.tsv file.

Notes

Debug Mode

https://gitlab-dynamap.timone.univ-amu.fr/anywave/anywave/-/wikis/Py_debug

Plugin Basics

https://gitlab-dynamap.timone.univ-amu.fr/anywave/anywave/-/wikis/Python_plugins