Dev (#7)

* Update wdl to GATK4.1 * Updated imports to git tag URL, updated gatk docker in json, updated Readme structure * minor edits and link to documentation in readme * import url correction
gatk-workflows · Feb 14, 2019 · 08c3f76 · 08c3f76
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commit 08c3f76
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diff --git a/cnv_somatic_pair_workflow.wdl b/cnv_somatic_pair_workflow.wdl
@@ -29,8 +29,8 @@
 #
 #############
 
-import "https://raw.githubusercontent.com/gatk-workflows/gatk4-somatic-cnvs/1.2/cnv_common_tasks.wdl" as CNVTasks
-import "https://raw.githubusercontent.com/gatk-workflows/gatk4-somatic-cnvs/1.2/cnv_somatic_oncotator_workflow.wdl" as CNVOncotator
+import "https://raw.githubusercontent.com/gatk-workflows/gatk4-somatic-cnvs/1.2.0/cnv_common_tasks.wdl" as CNVTasks
+import "https://raw.githubusercontent.com/gatk-workflows/gatk4-somatic-cnvs/1.2.0/cnv_somatic_oncotator_workflow.wdl" as CNVOncotator
 
 workflow CNVSomaticPairWorkflow {
 

diff --git a/cnv_somatic_panel_workflow.wdl b/cnv_somatic_panel_workflow.wdl
@@ -26,7 +26,7 @@
 #
 #############
 
-import "https://raw.githubusercontent.com/gatk-workflows/gatk4-somatic-cnvs/1.2/cnv_common_tasks.wdl" as CNVTasks
+import "https://raw.githubusercontent.com/gatk-workflows/gatk4-somatic-cnvs/1.2.0/cnv_common_tasks.wdl" as CNVTasks
 
 workflow CNVSomaticPanelWorkflow {