added md5sum script

gbenison · Oct 24, 2011 · 7637834 · 7637834
1 parent da61579
commit 7637834
Showing 1 changed file with 7 additions and 0 deletions.
diff --git a/fastamd5 b/fastamd5
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+#!/bin/sh
+# GCB 24oct11 generate an MD5 sum of just the sequence, skipping the header and any whitespace
+
+basedir=`dirname $0`;
+
+${basedir}/fastalint $1 | egrep -v '^>' | perl -ane '{chomp; print;}' | md5sum
+