fixing post html page test

.Rhistory

@@ -1,4 +1,3 @@
-escape=FALSE,
 bold=TRUE,
 link=urls)) %>%
 select(rank,NAME,occ_count_label,occ_count_letter,occ_density_land,occ_density_no_birds_land,occ_density_water) %>%
@@ -510,3 +509,4 @@ blogdown:::serve_site()
 blogdown:::serve_site()
 blogdown:::serve_site()
 blogdown:::insert_image_addin()
+blogdown:::serve_site()

.Rproj.user/749CECDD/console06/INDEX001

@@ -1 +1 @@
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+[{"allow_restart":true,"alt_buffer":false,"autoclose":1,"buffered_output":"\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n","caption":"Terminal 1","channel_id":"4955","channel_mode":1,"child_procs":false,"cols":130,"cwd":"","exit_code":15,"handle":"3B6B4359","interaction_mode":2,"max_output_lines":1000,"restarted":true,"rows":53,"shell_type":1,"show_on_output":false,"terminal_sequence":1,"title":":/c/Users/ftw712/Desktop/data-blog","track_env":false,"zombie":false}]

.Rproj.user/749CECDD/pcs/files-pane.pper

@@ -1,5 +1,5 @@
 {
-    "path" : "C:/Users/ftw712/Desktop/data-blog/static/post/2019-09-06-living-specimen-to-preserved-specimen-understanding-basis-of-record_files",
+    "path" : "C:/Users/ftw712/Desktop/data-blog/static/post",
     "sortOrder" : [
         {
             "ascending" : true,

.Rproj.user/749CECDD/pcs/windowlayoutstate.pper

@@ -1,14 +1,14 @@
 {
     "left" : {
-        "panelheight" : 1022,
-        "splitterpos" : 438,
+        "panelheight" : 974,
+        "splitterpos" : 417,
         "topwindowstate" : "NORMAL",
-        "windowheight" : 1060
+        "windowheight" : 1012
     },
     "right" : {
-        "panelheight" : 1022,
-        "splitterpos" : 545,
+        "panelheight" : 974,
+        "splitterpos" : 519,
         "topwindowstate" : "NORMAL",
-        "windowheight" : 1060
+        "windowheight" : 1012
     }
 }

public/post/gbif-backbone-taxonomy/index.html

@@ -203,7 +203,7 @@ <h1 id="what-is-the-gbif-backbone-taxonomy">What is the GBIF Backbone taxonomy?<
 <p>a single synthetic management classification with the goal of covering all names GBIF is dealing with.</p>
 </blockquote>
 
-<p>The newest version (September 2019) contains 5,858,143 names. Most of these names are animals. Plus, a large part of these names are actually synonyms (see pie charts below).
+<p>The newest version (September 2019) contains 6,586,625 names. Most of these names are animals. Plus, a large part of these names are actually synonyms (see pie charts below).
 <img src="/post/2019-08-19-gbif-backbone-taxonomy/stats.september2019.001.jpeg" alt="Statistics Backbone taxonomy - September 2019" /></p>
 
 <p>If you are interested, I suggest that you browse <a href="https://www.gbif.org/species/search">our web interface</a> or check out the <a href="https://www.gbif.org/developer/species">Species API</a></p>

public/sitemap.xml

@@ -323,14 +323,14 @@
   </url>
 
   <url>
-    <loc>/tags/gbif/</loc>
+    <loc>/categories/gbif/</loc>
     <lastmod>2019-09-16T00:00:00+00:00</lastmod>
     <changefreq>weekly</changefreq>
     <priority>0</priority>
   </url>
 
   <url>
-    <loc>/categories/gbif/</loc>
+    <loc>/tags/gbif/</loc>
     <lastmod>2019-09-16T00:00:00+00:00</lastmod>
     <changefreq>weekly</changefreq>
     <priority>0</priority>
@@ -582,14 +582,14 @@
   </url>
 
   <url>
-    <loc>/tags/taxonomy/</loc>
+    <loc>/categories/taxonomy/</loc>
     <lastmod>2019-09-16T00:00:00+00:00</lastmod>
     <changefreq>weekly</changefreq>
     <priority>0</priority>
   </url>
 
   <url>
-    <loc>/categories/taxonomy/</loc>
+    <loc>/tags/taxonomy/</loc>
     <lastmod>2019-09-16T00:00:00+00:00</lastmod>
     <changefreq>weekly</changefreq>
     <priority>0</priority>

public/tags/gbif/index.html

@@ -251,21 +251,5 @@ <h2 class="archive-name">GBIF</h2>
 
 
 
-</body>
-</html>
-vascript" src="/lib/jquery/jquery-3.2.1.min.js"></script>
-  <script type="text/javascript" src="/lib/slideout/slideout-1.0.1.min.js"></script>
-
-
-
-<script type="text/javascript" src="/dist/even.min.js?v=3.2.0"></script>
-
-
-
-
-
-
-
-
 </body>
 </html>

public/tags/gbif/index.xml

@@ -1,48 +1,45 @@
 <?xml version="1.0" encoding="utf-8" standalone="yes" ?>
 <rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom">
   <channel>
-    <title>GBIF on GBIF Data Blog</title>
+    <title>Gbif on GBIF Data Blog</title>
     <link>/tags/gbif/</link>
-    <description>Recent content in GBIF on GBIF Data Blog</description>
+    <description>Recent content in Gbif on GBIF Data Blog</description>
     <generator>Hugo -- gohugo.io</generator>
     <language>en</language>
-    <lastBuildDate>Mon, 16 Sep 2019 00:00:00 +0000</lastBuildDate>
+    <lastBuildDate>Fri, 09 Nov 2018 00:00:00 +0000</lastBuildDate>
 
 	<atom:link href="/tags/gbif/index.xml" rel="self" type="application/rss+xml" />
 
 
     <item>
-      <title>Six questions answered about the GBIF Backbone Taxomomy</title>
-      <link>/post/gbif-backbone-taxonomy/</link>
-      <pubDate>Mon, 16 Sep 2019 00:00:00 +0000</pubDate>
+      <title>Finding citizen science datasets on GBIF</title>
+      <link>/post/gbif-citizen-science/</link>
+      <pubDate>Fri, 09 Nov 2018 00:00:00 +0000</pubDate>
 
-      <guid>/post/gbif-backbone-taxonomy/</guid>
-      <description>This past week our informatics team has been updating the Backbone taxonomy on GBIF.org. This is a fairly disruptive process which sometimes involves massive taxonomic changes but DON’T PANIC.
-This update is a good thing. It means that some of the taxonomic issues reported have been addressed (see for example this issue concerning the Xylophagidae family) and that new species are now visible on GBIF. Plus, it gives me an excellent opportunity to talk about the GBIF backbone taxonomy and answer some of the questions you might have.</description>
+      <guid>/post/gbif-citizen-science/</guid>
+      <description>Can we automatically label citizen science datasets? The short answer is yes, partially.
+Why label GBIF datasets as &amp;ldquo;citizen science&amp;rdquo;? What is citizen science? Citizen science is scientific research conducted, in whole or in part, by amateur (or non-professional) scientists. Citizen science is sometimes described as &amp;ldquo;public participation in scientific research,&amp;rdquo; participatory monitoring, and participatory action research (wikipedia definition).
+Citizen science on GBIF A 2016 study showed that nearly half of all occurrence records shared through the GBIF network come from datasets with significant volunteer contributions (for more information, see our &amp;ldquo;citizen science&amp;rdquo; page on gbif.</description>
     </item>
 
     <item>
-      <title>Sequenced-based data on GBIF - What you need to know before analyzing data</title>
-      <link>/post/gbif-molecular-data-quality/</link>
-      <pubDate>Fri, 26 Apr 2019 00:00:00 +0000</pubDate>
+      <title>Plot almost anything using the GBIF maps api</title>
+      <link>/post/gbif-maps-api-using-r-and-leaflet/</link>
+      <pubDate>Wed, 19 Sep 2018 00:00:00 +0000</pubDate>
 
-      <guid>/post/gbif-molecular-data-quality/</guid>
-      <description>As I mentioned in my previous post, a lot more sequence-based data has been made available on GBIF this past year. MGnify alone, published 295 datasets for a total of 13,285,109 occurrences. Even though most of these occurrences are Bacteria or Chromista, more than a million of them are animals and more than 300,000 are plants. So chances are, that even if you are not interested in bacteria, you might encounter sequence-based data on GBIF.</description>
+      <guid>/post/gbif-maps-api-using-r-and-leaflet/</guid>
+      <description>The GBIF maps api is an under-used but powerful web service provided by GBIF. The maps api is used by the main GBIF portal to create the maps including the big map used on gbif.org. We can make a simple call to the api by pasting the link below into a web browser.
+https://api.gbif.org/v2/map/occurrence/density/0/0/0@1x.png?style=purpleYellow.pointYou should end up with an image like this.This api call is composed essentially of two elements</description>
     </item>
 
     <item>
-      <title>Sequence-based data on GBIF - Sharing your data</title>
-      <link>/post/gbif-molecular-data/</link>
-      <pubDate>Wed, 24 Apr 2019 00:00:00 +0000</pubDate>
+      <title>GBIF download trends</title>
+      <link>/post/gbif-download-trends/</link>
+      <pubDate>Tue, 14 Aug 2018 00:00:00 +0000</pubDate>
 
-      <guid>/post/gbif-molecular-data/</guid>
-      <description>GBIF is trying to make it easier to share sequence-based data. In fact, this past year alone, we worked with UNITE to integrate species hypothesis for fungi and with EMBL-EBI to publish 295 metagenomics datasets.
-Unfortunately, documentation is not as quick to follow. Although we have now an FAQ on the topic, I thought that anyone could use a blog post with some advice and examples.
-Note that this blog post is not intended to be documentation.</description>
-    </item>
-
-  </channel>
-</rss>he GBIF index currently sits at over 1 billion records (a 400+GB csv), most users will simplying filter by their taxonomic group of interest and then generate a download.</description>
+      <guid>/post/gbif-download-trends/</guid>
+      <description>Link To App
+Explanation of toolThis tool plots the downloads through time for species or other taxonomic groups with more than 25 downloads at GBIF. Downloads at GBIF most often occur through the web interface. In a previous post, we saw that most users are downloading data from GBIF via filtering by scientific name (aka Taxon Key). Since the GBIF index currently sits at over 1 billion records (a 400+GB csv), most users will simplying filter by their taxonomic group of interest and then generate a download.</description>
     </item>
 
     <item>