-
Notifications
You must be signed in to change notification settings - Fork 0
/
DESCRIPTION
39 lines (39 loc) · 1.19 KB
/
DESCRIPTION
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
Package: BDA
Type: Package
Title: Binary Differential analysis
Version: 0.1.0
Authors@R:
c(person(given = "Gerard",
family = "Bouland",
role = c("aut", "cre"),
email = "g.a.bouland@tudelft.nl"),
person(given = "Ahmed",
family = "Mahfouz",
role = "aut",
email = "a.Mahfouz@lumc.nl"),
person(given = "Marcel",
family = "Reinders",
role = "aut",
email = "m.j.t.Reinders@tudelft.nl"))
Description: Performs Binary Differential analysis (BDA) on single cell RNA
sequencing data. Instead of relying on changes in the expression value of genes
across cell populations, which can be sparse and are subject to many
pre-processing steps, BDA uses the binary gene expression patterns across
biological distinct cell populations, i.e. are there more or less zeros for a
gene in condition A compared to condition B.
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Depends:
R (>= 4.0.0)
Imports:
SeuratObject(>= 4.0.0),
ggplot2(>= 3.3.3),
Matrix,
foreach(>= 1.5.1),
doParallel(>= 1.0.16),
knitr(>= 1.31)
VignetteBuilder:
knitr
LazyDataCompression: bzip2