Merge pull request #329 from valentynbez/patch-1

fix: wrong attribute for `hmmer.plan7.Hit`
gbouras13 · Feb 6, 2024 · fbf1b3f · fbf1b3f
2 parents b1173c8 + 2206c61
commit fbf1b3f
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/bin/hmm.py b/bin/hmm.py
@@ -55,7 +55,7 @@ def run_pyhmmer(db_dir, out_dir, threads, gene_predictor, evalue):
                 best_results[result.protein] = result
                 keep_protein.add(result.protein)
             elif result.bitscore == previous_bitscore:
-                if best_results[result.protein].phrog != hit.phrog:
+                if best_results[result.protein].phrog != hit.name.decode():
                     keep_protein.remove(result.protein)
         else:
             best_results[result.protein] = result

diff --git a/bin/proteins.py b/bin/proteins.py
@@ -244,7 +244,7 @@ def run_pyhmmer_proteins(input_fasta, db_dir, threads, evalue):
                 best_results[result.protein] = result
                 keep_protein.add(result.protein)
             elif result.bitscore == previous_bitscore:
-                if best_results[result.protein].phrog != hit.phrog:
+                if best_results[result.protein].phrog != hit.name.decode():
                     keep_protein.remove(result.protein)
         else:
             best_results[result.protein] = result