This repository contains the datasets used in the work entitled "Embedded-AMP: A multi-thread computational method for the systematic identification of antimicrobial peptides embedded in proteome sequences" by German Melendrez Carballo, Karen Guerrero Vazquez, Luis A. Garcia-Gonzalez, Gabriel Del Rio and Carlos A. Brizuela.
We provide the AMP/non-AMP dataset used to train SVMAMP and the proteomes that were used to validate the efficiency of the codes reported in that work.
The proteomes of organisms with a longevity reported at the AnAge database are also included in the datasets directory.
If you have any questions or are interesting in supporting our work, please contact us at:
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Dr. Carlos Brizuela (cbrizuel@cicese.edu.mx )
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Dr. Gabriel Del Rio (gdelrio@ifc.unam.mx)