install uses copy instead of symlink

[joamatab]

• install uses copy instead of symlink if symlink fails
• add gf.cross_section.rib_with_trenches
• use python instead of jupyter notebooks to build docs
• logger does not automatically print the version of the tool
• gf --version prints all plugin versions

@thomasdorch

[sourcery-ai]

Sourcery Code Quality Report

✅  Merging this PR will increase code quality in the affected files by 0.43%.

Quality metrics	Before	After	Change
Complexity	2.62 ⭐	2.58 ⭐	-0.04 👍
Method Length	93.81 🙂	92.31 🙂	-1.50 👍
Working memory	15.20 ⛔	15.06 😞	-0.14 👍
Quality	59.37% 🙂	59.80% 🙂	0.43% 👍

Other metrics	Before	After	Change
Lines	3158	3257	99

Changed files	Quality Before	Quality After	Quality Change
docs/notebooks/08_pdk.py	52.85% 🙂	52.85% 🙂	0.00%
docs/notebooks/09_pdk_import.py	57.26% 🙂	57.26% 🙂	0.00%
gdsfactory/cli.py	84.96% ⭐	82.60% ⭐	-2.36% 👎
gdsfactory/config.py	79.47% ⭐	81.32% ⭐	1.85% 👍
gdsfactory/cross_section.py	49.74% 😞	50.03% 🙂	0.29% 👍
gdsfactory/install.py	75.26% ⭐	77.29% ⭐	2.03% 👍
gdsfactory/klive.py	75.73% ⭐	75.73% ⭐	0.00%
gdsfactory/components/spiral_double.py	60.09% 🙂	60.09% 🙂	0.00%
gdsfactory/geometry/offset.py	63.11% 🙂	63.11% 🙂	0.00%

Here are some functions in these files that still need a tune-up:

File	Function	Complexity	Length	Working Memory	Quality	Recommendation
gdsfactory/cross_section.py	pn_with_trenches	7 ⭐	508 ⛔	47 ⛔	26.95% 😞	Try splitting into smaller methods. Extract out complex expressions
gdsfactory/cross_section.py	pn	7 ⭐	477 ⛔	45 ⛔	27.13% 😞	Try splitting into smaller methods. Extract out complex expressions
gdsfactory/cross_section.py	pn_ge_detector_si_contacts	7 ⭐	424 ⛔	43 ⛔	27.59% 😞	Try splitting into smaller methods. Extract out complex expressions
gdsfactory/cross_section.py	rib_heater_doped_via_stack	8 ⭐	254 ⛔	27 ⛔	32.23% 😞	Try splitting into smaller methods. Extract out complex expressions
gdsfactory/cross_section.py	cross_section	4 ⭐	179 😞	39 ⛔	39.95% 😞	Try splitting into smaller methods. Extract out complex expressions

Legend and Explanation

The emojis denote the absolute quality of the code:

• ⭐ excellent
• 🙂 good
• 😞 poor
• ⛔ very poor

The 👍 and 👎 indicate whether the quality has improved or gotten worse with this pull request.

---

Please see our documentation here for details on how these metrics are calculated.

We are actively working on this report - lots more documentation and extra metrics to come!

Help us improve this quality report!

[codecov]

Codecov Report

Merging #1375 (38e33ec) into main (4b367fa) will decrease coverage by 0.01%.
The diff coverage is 33.33%.

❗ Current head 38e33ec differs from pull request most recent head c957eb0. Consider uploading reports for the commit c957eb0 to get more accurate results

@@            Coverage Diff             @@
##             main    #1375      +/-   ##
==========================================
- Coverage   69.68%   69.67%   -0.01%     
==========================================
  Files         366      366              
  Lines       21828    21832       +4     
  Branches     3127     3127              
==========================================
+ Hits        15210    15211       +1     
- Misses       5718     5721       +3     
  Partials      900      900              

Impacted Files	Coverage Δ
gdsfactory/components/spiral_double.py	100.00% <ø> (ø)
gdsfactory/geometry/offset.py	77.77% <ø> (ø)
gdsfactory/install.py	19.51% <0.00%> (-0.49%)	⬇️
gdsfactory/cross_section.py	66.01% <33.33%> (-0.56%)	⬇️
gdsfactory/config.py	65.34% <50.00%> (-0.66%)	⬇️

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