Skip to content
forked from cmw48/insitu

Processing PubMed XML with python

Notifications You must be signed in to change notification settings

geekheal/insitu

 
 

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

4 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

#insitu

INSITU - Experiment with Python and PubMed XML

Using iterparse to return information from large XML files generated by PubMed

This program will (eventually) find PubMed references "in situ" in the PubMed database. Copyright (C) 2010 Chris Westling, Mann Library ITS, Cornell University

This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program.  If not, see <http://www.gnu.org/licenses/>.

WARNING: work in progress - test on small files first!

TODO: build GUI, better exception handling, code cleanup and optimization

INFO: Chris Westling Mann Library ITS, Cornell University, Ithaca, NY

E-MAIL: cmw48@cornell.edu

About

Processing PubMed XML with python

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages

  • Python 100.0%