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README.md

MacSyView is an HTML5 interface to facilitate the analysis of results of the MacSyFinder tool. It shows overviews of their component contents and genomic context.

Quick start

To use MacSyView, once you have cloned the git repository, just open the app/index.html with your favorite browser:

firefox app/index.html

You can then click the "Browse" button to open a MacSyFinder JSON results file.

Citation

If you use MacSyFinder/MacSyView, please cite: MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems. Abby SS, Néron B, Ménager H, Touchon M, Rocha EPC. PLoS ONE 9(10): e110726. doi:10.1371/journal.pone.0110726

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MacSyView - A web app for visualization of MacSyFinder's results.

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