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Review annotation to GO:0030816 positive regulation of cAMP metabolic process and GO:0030815 negative #2000

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pgaudet opened this issue May 31, 2018 · 4 comments

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@pgaudet
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pgaudet commented May 31, 2018

Hello,

For the G-protein coupled receptor signaling work, I will obsolete
GO:0030816 positive regulation of cAMP metabolic process. Please review your annotation:
https://docs.google.com/spreadsheets/d/14w1MbDnbvtJgP1U6E6LxpkS_RhyJUs9MfUOylLkkbl0/edit#gid=0

Group | # annotations
-- | --
AgBase | 1
ARUK-UCL | 32
BHF-UCL | 1
RGD | 5
UniProt | 17

Annotated proteins are receptor or ligands, I propose to move annotation to either

GO:0007189 adenylate cyclase-activating G-protein coupled receptor signaling pathway
or
GO:0007193 adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
as appropriate.

Thanks, Pascale

@ukemi ukemi mentioned this issue May 31, 2018
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@pgaudet pgaudet changed the title Review annotation to GO:0030816 positive regulation of cAMP metabolic process Review annotation to GO:0030816 positive regulation of cAMP metabolic process and GO:0030815 negative May 31, 2018
@slaulederkind
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All RGD annotations fixed.

@pgarmiri
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pgarmiri commented Jun 5, 2018

I checked and removed the one IDA EBI annotation. Contacted the SIB curator to update their 4 IDA annotations. The rest are by ISS and they will be updated automatically when the parent term has changed.

@pgarmiri pgarmiri removed their assignment Jun 5, 2018
@vanaukenk vanaukenk assigned RLovering and unassigned RLovering Jun 11, 2018
@BarbaraCzub
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I reviewed all the ARUK-UCL annotations.

@RLovering RLovering removed their assignment Oct 30, 2020
@RLovering
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BHF-UCL done too

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