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NEWS.md

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MLExpResso 0.1.6

  • new functions: plot_means, plot_pvalues
  • plot_means, plot_pvalues, plot_volcano, plot_methylation_path functions added to the QuickStart

MLExpResso 0.1.6

MLExpResso 0.1.5

  • more tests for expression and methylation (based on packages methyAnalysis and edgeR)
  • adding a simple guide for the user - QuickStart
  • first unit tests for package
  • more parameters in public functions
  • new public function names (old -> new):
    • test_diff -> calculate_test
    • comparison table -> calculate_comparison_table
    • map_to_gene -> aggregate_probes
    • mehylation_path -> plot_methylation_path
    • volcano_plot -> plot_volcano
    • group_boxplot -> plot_diff_boxplot
    • visual_volcano -> plot_volcanoes
    • visual_gene -> plot_gene
    • report_generate -> generate_report