Remove RNA-SeQC metrics from RNATables QC fields

genialis · Apr 22, 2024 · dcf406f · dcf406f
1 parent 6398e17
commit dcf406f
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diff --git a/docs/CHANGELOG.rst b/docs/CHANGELOG.rst
@@ -9,11 +9,14 @@ All notable changes to this project are documented in this file.
 Unreleased
 ==========
 
+Changed
+-------
+- Remove ``RNA-SeQC`` metrics from ``RNATables`` QC fields
+
 Added
 -----
 - Add ``restart`` method to the ``Data`` resource
 
-
 Fixed
 -----
 - Fix fetching ``RNATables`` for collections with missing MultiQC objects by

diff --git a/src/resdk/tables/rna.py b/src/resdk/tables/rna.py
@@ -163,18 +163,6 @@
         "type": "Int64",
         "agg_func": "mean",
     },
-    {
-        "name": "RNA-SeQC_mqc-generalstats-rna_seqc-Expression_Profiling_Efficiency",
-        "slug": "profiling_efficiency",
-        "type": "float64",
-        "agg_func": "mean",
-    },
-    {
-        "name": "RNA-SeQC_mqc-generalstats-rna_seqc-Genes_Detected",
-        "slug": "genes_detected",
-        "type": "Int64",
-        "agg_func": "mean",
-    },
     {
         "slug": "strandedness_code",
         "type": "string",