CQScript

A collect of scripts when I work at Vanderbilt

Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
GainLOH		GainLOH
Genetorrent		Genetorrent
Strandbias		Strandbias
cmdrunner		cmdrunner
cnv		cnv
dbSNPDistance		dbSNPDistance
defuse		defuse
fusionhunter		fusionhunter
geneMutation		geneMutation
makePlink		makePlink
peakseq		peakseq
README.md		README.md
batch_tophat.pl		batch_tophat.pl
check_phred_score.pl		check_phred_score.pl
fastq_summary.pl		fastq_summary.pl
free		free
getReadsinCodingFromBam.pl		getReadsinCodingFromBam.pl
get_reads_in_coding_region.R		get_reads_in_coding_region.R
get_reads_lane_info.pl		get_reads_lane_info.pl
liftOver.pl		liftOver.pl
makedir		makedir
merge_fastqc_report.pl		merge_fastqc_report.pl
mydel		mydel
mygroup		mygroup
myjob		myjob
myjob2		myjob2
myjobq		myjobq
nodes		nodes
nodestate.pl		nodestate.pl
pbs		pbs
pbspl		pbspl
pl		pl
print_directory_str.pl		print_directory_str.pl
run_bwa.pl		run_bwa.pl
run_fastQC.pl		run_fastQC.pl

geniusphil/CQScripts