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Skip flight observations outside a nested domain #21

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@ngc2244 ngc2244 commented Nov 24, 2018

Skip flight observations outside the nested domains. Now the code works for all 0.5 and 0.25 nested domains. LAT and LON ranges are defined as in http://wiki.seas.harvard.edu/geos-chem/index.php/GEOS-Chem_horizontal_grids.

Skip flight observations outside the nested domains. LAT and LON ranges are based on http://wiki.seas.harvard.edu/geos-chem/index.php/GEOS-Chem_horizontal_grids.
@ngc2244 ngc2244 changed the title Update planeflight_mod.F Skip flight observations outside a nested domain Nov 25, 2018
msulprizio pushed a commit that referenced this pull request Nov 26, 2018
Corrected various issues with the remaining ocean Hg diagnostics.

Also added the equivalent of ND03 #21 (Hg2 and HgP deposited to snow
and ice).  This involved passing State_Diag to the convection, drydep,
and wetdep modules.  NOTE: This diagnostic does not match the bpch
output, probably due to how the bpch diagnostic was implemented.
Need to think of a better way to handle that.

Also added netCDF diagnostics for particulate bound mercury (PBM)
and reactive gaseous mercury (RGM) in GeosCore/diagnostics_mod.F90.

Added a new routine called Reset_Hg_Diags in GeosCore/mercury_mod.F90,
which zeroes out several relevant fields of State_Diag for the Hg
simulations.

Removed the module fvdas_convect_mod.F; we no longer use GEOS-4
meteorology, so this was orphaned.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
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Thanks for this update, Lei. We can include it in 12.2.0.

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Now in dev/12.2.0 branch

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This fix is in dev/12.1.1 branch and will be released with that version soon.

@msulprizio msulprizio closed this Dec 11, 2018
@ngc2244 ngc2244 deleted the mytest branch January 23, 2019 18:14
yantosca added a commit that referenced this pull request Apr 10, 2019
(1) The species DHDC is listed in the FJX_j2j.dat file, but species
    DHDN was flagged as the photolyzing species in the GEOS-Chem
    species database.  This has now been fixed as follows:

    (a) Removed Is_Photolysis=T line from the DHDN species database
        entry and added it to the DHDC species database entry
        (in module Headers/species_database_mod.F90)

    (b) Changed the tracerinfo.dat metadata for the ND22 diagnostic
        from DHDN to DHDC in GeosCore/gamap_mod.F)

(2) There were duplicate entries (#21, #101) for ClNO2 in the input
    file ExtData/CHEM_INPUTS/FAST_JX/v2018-09/FJX_j2j.dat.  We have
    fixed this issue as follows:

    (a) Created a new file with the duplicate entry #101 removed:
        ExtData/CHEM_INPUTS/FAST_JX/v2019-04/FJX_j2j.dat

    (b) Copied all of the other FAST-JX input files from the v2018-09
        to the v2019-04 folder, from which they are now read.

    (c) Changed JVN_ from 130 to 129 in Headers/CMN_FJX_MOD.F.
        This parameter specifies the number of photolyzing species.

(3) Also changed the GEOS_Chem version number to 12.3.2 in the
    file GeosCore/gc_classic_version.H.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
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