v1.0.1a1

[ggirelli]

First release, not alpha.

[sourcery-ai]

Sourcery Code Quality Report

❌  Merging this PR will decrease code quality in the affected files by 1.39%.

Quality metrics	Before	After	Change
Complexity	3.09 ⭐	3.85 ⭐	0.76 👎
Method Length	49.96 ⭐	52.06 ⭐	2.10 👎
Working memory	7.52 🙂	9.42 🙂	1.90 👎
Quality	73.50% 🙂	72.11% 🙂	-1.39% 👎

Other metrics	Before	After	Change
Lines	2252	2539	287

Changed files	Quality Before	Quality After	Quality Change
ifpd2/init.py	97.84% ⭐	89.76% ⭐	-8.08% 👎
ifpd2/asserts.py	83.30% ⭐	79.11% ⭐	-4.19% 👎
ifpd2/const.py	100.00% ⭐	89.83% ⭐	-10.17% 👎
ifpd2/database.py	83.86% ⭐	76.15% ⭐	-7.71% 👎
ifpd2/logging.py	76.47% ⭐	73.88% 🙂	-2.59% 👎
ifpd2/oligo.py	77.66% ⭐	77.48% ⭐	-0.18% 👎
ifpd2/probe.py	71.64% 🙂	69.07% 🙂	-2.57% 👎
ifpd2/probe_set.py	76.25% ⭐	75.75% ⭐	-0.50% 👎
ifpd2/walker.py	69.48% 🙂	70.02% 🙂	0.54% 👍
ifpd2/walker2.py	93.93% ⭐	81.01% ⭐	-12.92% 👎
ifpd2/scripts/init.py	87.68% ⭐	87.02% ⭐	-0.66% 👎
ifpd2/scripts/arguments.py	89.52% ⭐	87.52% ⭐	-2.00% 👎
ifpd2/scripts/ifpd2.py	86.89% ⭐	96.18% ⭐	9.29% 👍
ifpd2/scripts/query.py	62.34% 🙂	44.34% 😞	-18.00% 👎

Here are some functions in these files that still need a tune-up:

File	Function	Complexity	Length	Working Memory	Quality	Recommendation
ifpd2/scripts/query.py	main	6 ⭐	587 ⛔	62 ⛔	27.61% 😞	Try splitting into smaller methods. Extract out complex expressions
ifpd2/probe.py	OligoProbeBuilder._assert	22 😞	250 ⛔	6 ⭐	45.08% 😞	Refactor to reduce nesting. Try splitting into smaller methods
ifpd2/walker.py	GenomicWindowSet.__mk_all_window_sets	5 ⭐	231 ⛔	13 😞	46.16% 😞	Try splitting into smaller methods. Extract out complex expressions
ifpd2/walker.py	Walker.process_window	4 ⭐	176 😞	16 ⛔	47.41% 😞	Try splitting into smaller methods. Extract out complex expressions
ifpd2/walker.py	Walker._preprocess_window_do	7 ⭐	134 😞	15 😞	49.92% 😞	Try splitting into smaller methods. Extract out complex expressions

Legend and Explanation

The emojis denote the absolute quality of the code:

• ⭐ excellent
• 🙂 good
• 😞 poor
• ⛔ very poor

The 👍 and 👎 indicate whether the quality has improved or gotten worse with this pull request.

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Please see our documentation here for details on how these metrics are calculated.

We are actively working on this report - lots more documentation and extra metrics to come!

Help us improve this quality report!