unfit_filter_output
Gal Horesh edited this page Mar 6, 2019
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2 revisions
| Column | Name | Description |
|---|---|---|
| 1 | Domain | Highest scoring profile in this hit |
| 2 | HMMER_score | Score returned by hmmscan |
| 3 | Contig | The identifier of the contig of this hit |
| 4 | Strand | Strand of the hit |
| 5 | Hit_length | Length of the hit (aa) |
| 6 | Hit_start | Start of hit sequence on the contig |
| 7 | Hit_stop | Stop of hit sequence on the contig |
| 8 | Sequence | Hit sequence |
| 9 | Reasons | Reason(s) hit was discarded / one partner gene did not fit |
Two reasons will appear when using order either or both if the hit was discarded because of both partners.