Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

if server is a ro server, and requires location index or genome DB, f… #68

Merged
merged 4 commits into from
Sep 30, 2021
Merged

if server is a ro server, and requires location index or genome DB, f… #68

Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
8df95ef
if server is a ro server, and requires location index or genome DB, f…
benjiec Sep 30, 2021
55742b0
no eggs
benjiec Sep 30, 2021
b2d76fc
Revert "no eggs"
benjiec Sep 30, 2021
5d8f7c8
no eggs
benjiec Sep 30, 2021
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
6 changes: 6 additions & 0 deletions src/edge/views.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,8 @@
from edge import import_gff
from edge.tasks import build_genome_blastdb, build_genome_fragment_indices

IS_RO_SERVER = os.getenv("RO_SERVER", False) == "True"


def genome_export(request, genome_id):
get_genome_or_404(genome_id)
Expand Down Expand Up @@ -584,6 +586,10 @@ def on_post(self, request, genome_id):
from edge.blastdb import check_and_build_genome_db

genome = get_genome_or_404(genome_id)

if IS_RO_SERVER and (not genome.has_location_index or not genome.blastdb):
return [], 409 # 409 is "Conflict" - caller is expected to retry request on RW server

check_and_build_genome_db(genome)

# always require a 'create' argument
Expand Down