globus-jupyter-notebooks
Install
These notebooks require Python 3.6+. See http://docs.python-guide.org/en/latest/starting/installation/ for easy Python installation instructions.
You may need to install pip and virtualenv first. For example, on macOS:
sudo easy_install pip
sudo pip install virtualenv
Clone the globus-jupyter-notebooks git reporsitory:
git clone https://github.com/globus/globus-jupyter-notebooks.git
Create a virtualenv:
cd globus-jupyter-notebooks
virtualenv venv
. ./venv/bin/activate
Install the notebook requirements using pip:
pip install -r requirements.txt
Run
To open a browser window with the Jupyter notebook interface:
jupyter-notebook Platform_Introduction_Native_App_Auth.ipynb
If running remotely, for example, in a tutorial EC2 instance:
jupyter notebook --ip="*" --no-browser
Links
- Globus SDK Documentation: https://globus-sdk-python.readthedocs.io/en/stable/
- Globus SDK Source: https://github.com/globus/globus-sdk-python
- Globus CLI Source: https://github.com/globus/globus-cli
Troubleshooting
pip install fails with message about Python.h
If pip install -r requirements.txt fails with a message including
Python.h: No such file or directory
it likely means that you don't have the python development headers installed.
Getting the headers is platform dependent.
On macOS this issue should not occur.
On Ubuntu:
sudo apt-get install python-dev
On RHEL and CentOS:
sudo yum install python-devel