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Changelog.md

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nsol

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0.4.0

  • [!86] Updated license file to LGPLv3.
  • [!85] Added method to force the recompute of the soma parameters
  • [!84] Fixed neuron transformation matrix load error
  • [!81] Connectivity load improvement
  • [!83] Added support to load mvd3 format circuit files in BrionReader and DataSet.…
  • [!82] Fix clone method for Dendrite and Axon objects

0.3.0

  • [!79] Spelling
  • [!78] Added neuron transform matrix compute nan check in the BrionReader
  • [!77] Documenting method loadMorphology of VectorsReader
  • [!69] Asc loader
  • [!74] Added functionality to load morphology from vectors
  • [!73] Avoid expose id as reference
  • [!72] Avoid include complete Eigen on each compilation
  • [!71] Fixed Doxygen warnings.
  • [!70] Vasculature
  • [!68] Refactored swc loader
  • [!65] Section class refactorized to support graph structures.

0.2.0

  • [!67] Changed version to 0.2.0. Updated Changelog.md. (doc)
  • [!66] Fixed brion morphology loader special case. Added loaders comparison test. (bug)
  • [!64] Minor changes in doc (doc)
  • [!63] Bump Brion and update BrionReader accordingly. (building)
  • [!59] Test stats. (testing)
  • [!61] Bugfix: reorder parameters in git clone. (doc)
  • [!60] Changed CMake to submodule. Fixes for CPack and install exporting examples code. Clean-ups. (building)
  • [!49] Added data structures and loaders for connectivity data.
  • [!58] Updated README.md and Changelog.md. Changed FiReS subproject url to Github. (building)(doc)
  • [!53] Added CI coverage.
  • [!57] License gplv3.
  • [!56] Updated Windows CI config (building)
  • [!55] Clean-ups and updates in examples. Removed BBPSDK old references. Removed Factory.h.
  • [!54] Move CI to sierra and vs14.
  • [!52] New method to adapt the trace fixing the intersected bifurcations
  • [!50] Fixes for GCC6 warnings.
  • [!48] Fixed unnused params in XMLSceneReader
  • [!47] Added options for examples and tests
  • [!46] Changed neuron loader reposition false by default. Fixed soma reposition in BrionReader
  • [!44] Fixing bug: rotation matrix of the neurons. (bug)
  • [!45] Fixed compute of soma params for file with 3 nodes per soma
  • [!43] Optional brion
  • [!42] Xml Scene Writer
  • [!41] Adapt to FiReS casing. Change CI optional deps building.
  • [!39] Morphology simplifier
  • [!40] Changed vmmlib to eigen.
  • [!38] Fixed warning for GCC 4.9
  • [!37] Added checking for enough fields in swc input files. Improved log class and upda…
  • [!33] Radius stat
  • [!35] Axon
  • [!34] Added more neuron types. Renamed HIERARCHY to CORTICAL_HIERARCHY. Added a contai…
  • [!32] Added a tool for extracting stats (to console or csv) from all the neurons of a DataSet.
  • [!30] Yml
  • [!29] Gitlab CI .YML
  • [!28] Updated to new fires naming (feature is now called property).
  • [!27] Fixed const methods and parameters. Removed tabs. Clean-ups.
  • [!26] Neuron types
  • [!25] Change neuron type. Get directly from bbpsdk
  • [!24] Added load option only HIERARCHY
  • [!22] Cmake update
  • [!19] First attempt to use a general Object class and an ObjectWithProperties class. Also Log class added.
  • [!16] Qt5 compile option
  • [!15] Load data
  • [!14] Added reposition on load. API modify SwcReader::readFile() -> readMorphology
  • [!13] Added first steps to load a XML scene. Added example scene.xml file in testData.…
  • [!11] Data set swc
  • [!9] Added load flags enum and fixed DataSet and BBPSDK reader to use it (only MORPHO…
  • [!8] Added DataSet class and example. Fixed cppcheck errors. Clean-ups.
  • [!7] Fixed cppcheck errors.
  • [!6] Added the option to specify target and types when loading a BlueConfig file. Clean-ups.
  • [!5] Vs10
  • [!4] Subproject