BIO 609 / 610 / 634 teaching Docker
Clone the repository:
git clone https://github.com/grexor/teachingDocker.git
or download (Code / Download ZIP on the right) and extract to a local folder (Desktop?) on your computer.
You need to have Docker installed (https://www.docker.com/products/docker-desktop).
Then build the container:
docker build . --tag biodocker
Make sure the build is successful (there is no error).
To run the container (login with username student) execute these commands in the terminal (console):
mkdir data
chmod 777 data
docker run -v `pwd`/data:/home/student/data --user student --hostname biodocker -ti biodocker bash --login
To run the container (login with username student) execute this commands in the Windows Prompt (cmd) terminal:
docker run -v "C:/Users/username/Desktop/teachingDocker/data":/home/student/data --hostname biodocker --user student -ti biodocker bash --login
The username should change depending on your environment. This also assumes you downloaded this repository to Desktop/teachingDocker.
If you are logged into the Docker container with username student you should see this:
(base) student@biodocker:~$
To make sure your data folder is writable, run this in the container:
touch data/test
If there is no error, everything works.