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Bioinformatics_Stronghold🏫

In this repository you can find my solutions for the Bioinformatics Stronghold Tasks from Rosalind.🧬

Sometimes I didn't reinvent the wheel, but just looked at ready-made solutions.

I was inspired mostly by egeulgen. Big thanks!

I will be glad if I can help someone with the following code.

Name		Name	Last commit message	Last commit date
Latest commit History 278 Commits
01. Counting DNA Nucleotides.py		01. Counting DNA Nucleotides.py
02. Transcribing DNA into RNA.py		02. Transcribing DNA into RNA.py
03. Complementing a Strand of DNA.py		03. Complementing a Strand of DNA.py
04. Mendel's First Law.py		04. Mendel's First Law.py
05. Rabbits and Recurrence Relations.py		05. Rabbits and Recurrence Relations.py
06. Computing GC Content.py		06. Computing GC Content.py
07. Translating RNA into Protein.py		07. Translating RNA into Protein.py
08. Finding a Motif in DNA.py		08. Finding a Motif in DNA.py
09. Counting Point Mutations.py		09. Counting Point Mutations.py
10. Calculating Expected Offspring.py		10. Calculating Expected Offspring.py
11. Mortal Fibonacci Rabbits.py		11. Mortal Fibonacci Rabbits.py
12. Inferring mRNA from Protein.py		12. Inferring mRNA from Protein.py
13. Independent Alleles.py		13. Independent Alleles.py
14. Calculating Protein Mass.py		14. Calculating Protein Mass.py
15. Overlap Graphs.py		15. Overlap Graphs.py
16. Finding a Protein Motif.py		16. Finding a Protein Motif.py
17. Consensus and Profile.py		17. Consensus and Profile.py
18. Open Reading Frames.py		18. Open Reading Frames.py
19. RNA Splicing.py		19. RNA Splicing.py
20. Finding a Shared Motif.py		20. Finding a Shared Motif.py
21. Enumerating Gene Orders.py		21. Enumerating Gene Orders.py
22. Locating Restriction Sites.py		22. Locating Restriction Sites.py
23. Perfect Matchings and RNA Secondary Structures.py		23. Perfect Matchings and RNA Secondary Structures.py
24. Partial Permutations.py		24. Partial Permutations.py
25. Completing a Tree.py		25. Completing a Tree.py
26. Introduction to Random Strings.py		26. Introduction to Random Strings.py
27. Genome Assembly as Shortest Superstring.py		27. Genome Assembly as Shortest Superstring.py
28. Finding a Spliced Motif.py		28. Finding a Spliced Motif.py
29. Transitions and Transversions.py		29. Transitions and Transversions.py
30. Enumerating k-mers Lexicographically.py		30. Enumerating k-mers Lexicographically.py
31. Longest Increasing Subsequence.py		31. Longest Increasing Subsequence.py
32. Enumerating Oriented Gene Orderings.py		32. Enumerating Oriented Gene Orderings.py
33. Maximum Matchings and RNA Secondary Structures.py		33. Maximum Matchings and RNA Secondary Structures.py
34. Counting Phylogenetic Ancestors.py		34. Counting Phylogenetic Ancestors.py
35. Counting Subsets.py		35. Counting Subsets.py
36. Catalan Numbers and RNA Secondary Structures.py		36. Catalan Numbers and RNA Secondary Structures.py
37. Speeding Up Motif Finding.py		37. Speeding Up Motif Finding.py
38. Creating a Distance Matrix.py		38. Creating a Distance Matrix.py
39. Matching Random Motifs.py		39. Matching Random Motifs.py
40. k-Mer Composition.py		40. k-Mer Composition.py
41. Error Correction in Reads.py		41. Error Correction in Reads.py
42. Finding a Shared Spliced Motif.py		42. Finding a Shared Spliced Motif.py
43. Ordering Strings of Varying Length Lexicographically.py		43. Ordering Strings of Varying Length Lexicographically.py
44. Reversal Distance.py		44. Reversal Distance.py
45. Distances in Trees.py		45. Distances in Trees.py
46. Introduction to Alternative Splicing.py		46. Introduction to Alternative Splicing.py
47. Introduction to Set Operations.py		47. Introduction to Set Operations.py
48. Motzkin Numbers and RNA Secondary Structures.py		48. Motzkin Numbers and RNA Secondary Structures.py
49. Inferring Protein from Spectrum.py		49. Inferring Protein from Spectrum.py
50. Introduction to Pattern Matching.py		50. Introduction to Pattern Matching.py
51. Interleaving Two Motifs.py		51. Interleaving Two Motifs.py
52. Expected Number of Restriction Sites.py		52. Expected Number of Restriction Sites.py
53. Edit Distance.py		53. Edit Distance.py
54. Sorting by Reversals.py		54. Sorting by Reversals.py
55. Newick Format with Edge Weights.py		55. Newick Format with Edge Weights.py
57. Independent Segregation of Chromosomes.py		57. Independent Segregation of Chromosomes.py
58. Constructing a De Bruijn Graph.py		58. Constructing a De Bruijn Graph.py
59. Comparing Spectra with the Spectral Convolution.py		59. Comparing Spectra with the Spectral Convolution.py
60. Wobble Bonding and RNA Secondary Structures.py		60. Wobble Bonding and RNA Secondary Structures.py
61. Inferring Peptide from Full Spectrum.py		61. Inferring Peptide from Full Spectrum.py
62. Finding Disjoint Motifs in a Gene.py		62. Finding Disjoint Motifs in a Gene.py
64. Edit Distance Alignment.py		64. Edit Distance Alignment.py
67. Counting Disease Carriers.py		67. Counting Disease Carriers.py
69. Genome Assembly with Perfect Coverage.py		69. Genome Assembly with Perfect Coverage.py
71. Using the Spectrum Graph to Infer Peptides.py		71. Using the Spectrum Graph to Infer Peptides.py
80. The Wright-Fisher Model of Genetic Drift.py		80. The Wright-Fisher Model of Genetic Drift.py
81. Sex-Linked Inheritance.py		81. Sex-Linked Inheritance.py
README.md		README.md

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