v6.0.1

6.0.1 (2024-02-21)

Bug Fixes

• clone command in test_trtools.sh testing script now works in pip installed versions of TRTools (#214) (756a516)

v6.0.0

6.0.0 (2024-02-19)

⚠ BREAKING CHANGES

• remove pybedtools as a dependency. This slightly changes the interpretation of BED files. From now on, the end position of each region will not be included. (#184)
• drop support for python 3.6 and specify unofficial support for python 3.7. Going forward, we will only continue to support versions of python that are "end of life".

Features

• add version constraints, poetry, and poetry.lock file, and use nox-poetry and py3.12 in CI (#202) (ed9c961)

Bug Fixes

• deprecation of binom_test in scipy 1.12.0 and cryptic error occurring with incorrect VCFs in cyvcf2 0.30.26 (#208) (78ec86a)

Code Refactoring

• remove pybedtools as a dependency. This slightly changes the interpretation of BED files. From now on, the end position of each region will not be included. (#184) (89c1dd3)

v5.1.1

Bug fixes:

• Remove stray files from source distribution (#195)

v5.1.0

New features:

• Added prancSTR for mosaicism detection
• Added simTR for simulating NGS reads with stutter errors at TRs

v5.0.2

v5.0.2