Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

CoxPH concordance missing in both Flow and in R/Py CoxPH summary #7837

Closed
exalate-issue-sync bot opened this issue May 11, 2023 · 2 comments
Closed

CoxPH concordance missing in both Flow and in R/Py CoxPH summary #7837

exalate-issue-sync bot opened this issue May 11, 2023 · 2 comments

Comments

@exalate-issue-sync
Copy link

  1. When displaying Cox PH model in Flow concordance never appears in any Output section.
  2. When using summary(coxph.model) in R (where coxph.model is H2O CoxPH model) then concordance is not included , while the same on R CoxPH model does include concordance:
    R:

!Screen Shot 2020-09-26 at 07.45.42.png|width=50%!

H2O R:

!Screen Shot 2020-09-26 at 07.48.33.png|width=50%!

Py lifelines summary output: [https://lifelines.readthedocs.io/en/latest/Survival Regression.html#fitting-the-regression|https://lifelines.readthedocs.io/en/latest/Survival%20Regression.html?highlight=concordance#fitting-the-regression]

H2O Py:

!Screen Shot 2020-09-26 at 08.12.41.png|width=846,height=642!

tested on master branch build

@exalate-issue-sync
Copy link
Author

Gregory Kanevsky commented: Even when concordance not computed (due to performance considerations) still have a placeholder for concordance result.

@h2o-ops
Copy link
Collaborator

h2o-ops commented May 14, 2023

JIRA Issue Migration Info

Jira Issue: PUBDEV-7805
Assignee: Ondrej Nekola
Reporter: Gregory Kanevsky
State: Resolved
Fix Version: 3.32.1.1
Attachments: Available (Count: 3)
Development PRs: Available

Linked PRs from JIRA

#5346

Attachments From Jira

Attachment Name: Screen Shot 2020-09-26 at 07.45.42.png
Attached By: Gregory Kanevsky
File Link:https://h2o-3-jira-github-migration.s3.amazonaws.com/PUBDEV-7805/Screen Shot 2020-09-26 at 07.45.42.png

Attachment Name: Screen Shot 2020-09-26 at 07.48.33.png
Attached By: Gregory Kanevsky
File Link:https://h2o-3-jira-github-migration.s3.amazonaws.com/PUBDEV-7805/Screen Shot 2020-09-26 at 07.48.33.png

Attachment Name: Screen Shot 2020-09-26 at 08.12.41.png
Attached By: Gregory Kanevsky
File Link:https://h2o-3-jira-github-migration.s3.amazonaws.com/PUBDEV-7805/Screen Shot 2020-09-26 at 08.12.41.png

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

1 participant