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PUBDEV-8947: aic glm #6672

Merged
merged 69 commits into from
May 19, 2023
Merged

PUBDEV-8947: aic glm #6672

merged 69 commits into from
May 19, 2023

Commits on Mar 30, 2023

  1. HEXDEV-785: implement loglikelihood calculation for all distributions… 

    … in GLMParams
    @syzonyuliia-h2o
    syzonyuliia-h2o committed Mar 30, 2023
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  2. HEXDEV-785: refactoring likelihood calculation in GLMWeightsFun - rem… 

    …oving duplicate calculation
    @syzonyuliia-h2o
    syzonyuliia-h2o committed Mar 30, 2023
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  3. HEXDEV-785: add python test on loglikelihood

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Mar 30, 2023
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  4. HEXDEV-785: refactor python test

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Mar 30, 2023
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  5. HEXDEV-785: return the check of family for likelihood calculation

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Mar 30, 2023
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  6. Revert "HEXDEV-785: refactoring likelihood calculation in GLMWeightsF… 

    …un - removing duplicate calculation"

This reverts commit f9627e8.
    @syzonyuliia-h2o
    syzonyuliia-h2o committed Mar 30, 2023
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  7. PUBDEV-8947: implement AIC calculation using loglikelihood function f… 

    …rom GLMParameters
    @syzonyuliia-h2o
    syzonyuliia-h2o committed Mar 30, 2023
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Commits on Apr 18, 2023

  1. HEXDEV-785: refactor log2pi

    @syzonyuliia
    syzonyuliia committed Apr 18, 2023
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Commits on Apr 19, 2023

  1. HEXDEV-785: review classification families, refactor and fix logarith… 

    …m calculations
    @syzonyuliia
    syzonyuliia committed Apr 19, 2023
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  2. HEXDEV-785: add multinomial family

    @syzonyuliia
    syzonyuliia committed Apr 19, 2023
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Commits on Apr 25, 2023

  1. HEXDEV-785: define probabilities when not given on input

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 25, 2023
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  2. add R unit test to check AIC, loglikelihood comparison to R.

    @wendycwong @syzonyuliia-h2o
    wendycwong authored and syzonyuliia-h2o committed Apr 25, 2023
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Commits on Apr 26, 2023

  1. HEXDEV-785: Expose likelihood value to model output

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 26, 2023
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  2. HEXDEV-785: apply calc_like parameter in GLM

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 26, 2023
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  3. HEXDEV-785: enable loglikelihood calculation in python and R tests

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 26, 2023
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Commits on Apr 28, 2023

  1. HEXDEV-785: limit loglikelihood calculation to the final scoring only

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 28, 2023
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  2. PUBDEV-8947: implement AIC calculation using loglikelihood function f… 

    …rom GLMParameters
    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 28, 2023
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  3. PUBDEV-8947: refactoring docs

    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 28, 2023
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  4. Merge remote-tracking branch 'origin/PUBDEV-8947-AIC-GLM' into PUBDEV… 

    …-8947-AIC-GLM
    @syzonyuliia-h2o
    syzonyuliia-h2o committed Apr 28, 2023
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Commits on May 1, 2023

  1. PUBDEV-8947: limiting AIC calculation to the final scoring only

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 1, 2023
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Commits on May 2, 2023

  1. HEXDEV-785: generate files with gradlew build

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 2, 2023
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  2. HEXDEV-785: use different likelihood calculations for build and final… 

    … scoring
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 2, 2023
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  3. updating AIC branch with loglikelihood implementation

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 2, 2023
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  4. PUBDEV-8947: use different AIC calculations for build and final scoring

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 2, 2023
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  5. PUBDEV-8947: remove new data from performance in R

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 2, 2023
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Commits on May 5, 2023

  1. add Java and R tests.

    @wendycwong @syzonyuliia-h2o
    wendycwong authored and syzonyuliia-h2o committed May 5, 2023
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  2. PUBDEV-8947: fix binomial likelihood calculation in java test

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 5, 2023
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  3. PUBDEV-8947: fix failing jenkins test - add likelihood to the list of… 

    … failing methods
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 5, 2023
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  4. PUBDEV-8947: start working on quasibinomial test

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 5, 2023
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  5. PUBDEV-8947: fix pojo test because of the added GLM parameter

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 5, 2023
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  6. Revert "PUBDEV-8947: start working on quasibinomial test" 

    This reverts commit 7da0072.
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 5, 2023
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  7. PUBDEV-8947: add tests for all distributions

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 5, 2023
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  8. PUBDEV-8947: label failing tests as ignored

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 5, 2023
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Commits on May 9, 2023

  1. PUBDEV-8947: fix the AIC tests on quasibinomial and fractionalbinomia… 

    …l families
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 9, 2023
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Commits on May 10, 2023

  1. Merge branch 'master' into HEXDEV-785-loglikelihood-GLM 

    # Conflicts:
#	h2o-docs/src/product/data-science/glm.rst
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  2. HEXDEV-785: update loglikelihood calculation for Tweedie family with … 

    …Tomas's implementation
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  3. Merge branch 'HEXDEV-785-loglikelihood-GLM' into PUBDEV-8947-AIC-GLM

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  4. PUBDEV-8947: update loglikelihood and AIC test for Tweedie family

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  5. HEXDEV-785: change likelihood calculation for GenerateWeights task ba… 

    …ck to the original implementation
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  6. HEXDEV-785: set parameters to true to enable estimation of dispersion… 

    … parameter
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  7. Merge branch 'HEXDEV-785-loglikelihood-GLM' into PUBDEV-8947-AIC-GLM

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  8. PUBDEV-8947: add java test for gaussian family

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  9. PUBDEV-8947: formatting - remove exceeding blank line

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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  10. Merge branch 'master' into PUBDEV-8947-AIC-GLM

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 10, 2023
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Commits on May 11, 2023

  1. PUBDEV-8947: fix setting parameters for HGLM

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 11, 2023
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  2. PUBDEV-8947: fix likelihood calculation in R test

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 11, 2023
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Commits on May 16, 2023

  1. PUBDEV-8947: tests update for dispersion parameter estimation

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 16, 2023
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  2. PUBDEV-8947: dispersion parameter estimation changes

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 16, 2023
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Commits on May 17, 2023

  1. Fix leaks in GLM's Negative Binomial estimation

    @tomasfryda
    tomasfryda committed May 17, 2023
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  2. Merge remote-tracking branch 'origin/tomf_PUBDEV-9087_fix_leak_in_neg… 

    …ative_binomial' into PUBDEV-8947-AIC-GLM
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  3. PUBDEV-8947: updating reference contents with loglikelihood

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  4. PUBDEV-8947: optimizing the family filter for the likelihood

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  5. PUBDEV-8947: fixing gamma likelihood calculation to use the estimated… 

    … dispersion parameter
    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  6. PUBDEV-8947: refactoring

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  7. PUBDEV-8947: cleaning code in test file

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  8. PUBDEV-8947: add cross-validation test

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  9. PUBDEV-8947: fix comment in api reference

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  10. PUBDEV-8947: regenerate files by build

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  11. PUBDEV-8947: add the check to avoid null pointer exception

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  12. PUBDEV-8947: edit the CV test for likelihood and aic

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  13. PUBDEV-8947: disable regularization for ML

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  14. PUBDEV-8947: change to init value in tweedie

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  15. PUBDEV-8947: set tweedie var power in test

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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  16. PUBDEV-8947: set tweedie var power in python test

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 17, 2023
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Commits on May 18, 2023

  1. PUBDEV-8947: clean redundant value write

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 18, 2023
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  2. PUBDEV-8947: clean prints

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 18, 2023
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  3. PUBDEV-8947: optimize binomial likelihood calculation

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 18, 2023
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  4. PUBDEV-8947: clarify k in negativebinomial formula

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 18, 2023
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  5. PUBDEV-8947: remove irrelevant condition for tweedie

    @syzonyuliia-h2o
    syzonyuliia-h2o committed May 18, 2023
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