Closed
Description
What happened?
Try writing to a bucket to which your service account has read-only access:
hl.utils.range_table(5,n_partitions=5).write('gs://neale-bge/foo.ht')
https://batch.hail.is/batches/8042383
The client gets an error like this:
Java stack trace:
is.hail.relocated.com.google.cloud.storage.StorageException: 404 Not Found
GET https://storage.googleapis.com/download/storage/v1/b/1-day/o/parallelizeAndComputeWithIndex%2FO3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=%2Fresult.0?alt=media
No such object: 1-day/parallelizeAndComputeWithIndex/O3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=/result.0
at is.hail.relocated.com.google.cloud.storage.StorageException.translate(StorageException.java:165)
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.translate(HttpStorageRpc.java:298)
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.load(HttpStorageRpc.java:729)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.lambda$readAllBytes$20(StorageImpl.java:610)
at com.google.api.gax.retrying.DirectRetryingExecutor.submit(DirectRetryingExecutor.java:103)
at is.hail.relocated.com.google.cloud.RetryHelper.run(RetryHelper.java:76)
at is.hail.relocated.com.google.cloud.RetryHelper.runWithRetries(RetryHelper.java:50)
at is.hail.relocated.com.google.cloud.storage.Retrying.run(Retrying.java:65)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.run(StorageImpl.java:1515)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.readAllBytes(StorageImpl.java:610)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.readAllBytes(StorageImpl.java:599)
at is.hail.io.fs.GoogleStorageFS.$anonfun$readNoCompression$1(GoogleStorageFS.scala:280)
at is.hail.services.package$.retryTransientErrors(package.scala:182)
at is.hail.io.fs.GoogleStorageFS.readNoCompression(GoogleStorageFS.scala:278)
at is.hail.io.fs.RouterFS.readNoCompression(RouterFS.scala:25)
at is.hail.backend.service.ServiceBackend.$anonfun$parallelizeAndComputeWithIndex$15(ServiceBackend.scala:225)
at scala.util.Try$.apply(Try.scala:213)
at is.hail.utils.package$.$anonfun$runAll$2(package.scala:995)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:750)
The driver will have log output like this:
2023-09-22 19:11:13.051 Requester: INFO: request GET http://batch.hail/api/v1alpha/batches/8042383 response 200
2023-09-22 19:11:13.052 ServiceBackend$: INFO: parallelizeAndComputeWithIndex: O3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=: reading results
2023-09-22 19:11:13.125 ServiceBackend$: INFO: all results read. 0.072746861 s. 0.0 result/s. 0.0 MiB/s.
2023-09-22 19:11:13.125 : INFO: [collectDArray|table_native_writer]: executed 5 tasks in 1.822s
2023-09-22 19:11:13.126 : INFO: RegionPool: initialized for thread 10: pool-2-thread-2
2023-09-22 19:11:13.126 : INFO: TaskReport: stage=0, partition=0, attempt=0, peakBytes=0, peakBytesReadable=0.00 B, chunks requested=0, cache hits=0
2023-09-22 19:11:13.126 : INFO: RegionPool: FREE: 0 allocated (0 blocks / 0 chunks), regions.size = 0, 0 current java objects, thread 10: pool-2-thread-2
2023-09-22 19:11:13.127 : INFO: RegionPool: initialized for thread 10: pool-2-thread-2
2023-09-22 19:11:13.127 : INFO: TaskReport: stage=0, partition=0, attempt=0, peakBytes=0, peakBytesReadable=0.00 B, chunks requested=0, cache hits=0
2023-09-22 19:11:13.127 : INFO: RegionPool: FREE: 0 allocated (0 blocks / 0 chunks), regions.size = 0, 0 current java objects, thread 10: pool-2-thread-2
2023-09-22 19:11:13.127 : INFO: RegionPool: FREE: 128.0K allocated (128.0K blocks / 0 chunks), regions.size = 2, 0 current java objects, thread 10: pool-2-thread-2
2023-09-22 19:11:13.138 : ERROR: GoogleJsonResponseException: 404 Not Found
GET https://storage.googleapis.com/download/storage/v1/b/1-day/o/parallelizeAndComputeWithIndex%2FO3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=%2Fresult.0?alt=media
No such object: 1-day/parallelizeAndComputeWithIndex/O3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=/result.0
From is.hail.relocated.com.google.cloud.storage.StorageException: 404 Not Found
GET https://storage.googleapis.com/download/storage/v1/b/1-day/o/parallelizeAndComputeWithIndex%2FO3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=%2Fresult.0?alt=media
No such object: 1-day/parallelizeAndComputeWithIndex/O3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=/result.0
at is.hail.relocated.com.google.cloud.storage.StorageException.translate(StorageException.java:165)
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.translate(HttpStorageRpc.java:298)
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.load(HttpStorageRpc.java:729)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.lambda$readAllBytes$20(StorageImpl.java:610)
at com.google.api.gax.retrying.DirectRetryingExecutor.submit(DirectRetryingExecutor.java:103)
at is.hail.relocated.com.google.cloud.RetryHelper.run(RetryHelper.java:76)
at is.hail.relocated.com.google.cloud.RetryHelper.runWithRetries(RetryHelper.java:50)
at is.hail.relocated.com.google.cloud.storage.Retrying.run(Retrying.java:65)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.run(StorageImpl.java:1515)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.readAllBytes(StorageImpl.java:610)
at is.hail.relocated.com.google.cloud.storage.StorageImpl.readAllBytes(StorageImpl.java:599)
at is.hail.io.fs.GoogleStorageFS.$anonfun$readNoCompression$1(GoogleStorageFS.scala:280)
at is.hail.services.package$.retryTransientErrors(package.scala:182)
at is.hail.io.fs.GoogleStorageFS.readNoCompression(GoogleStorageFS.scala:278)
at is.hail.io.fs.RouterFS.readNoCompression(RouterFS.scala:25)
at is.hail.backend.service.ServiceBackend.$anonfun$parallelizeAndComputeWithIndex$15(ServiceBackend.scala:225)
at scala.util.Try$.apply(Try.scala:213)
at is.hail.utils.package$.$anonfun$runAll$2(package.scala:995)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:750)
but the worker looks like this:
2023-09-22 19:11:12.125 JVMEntryway: INFO: is.hail.JVMEntryway received arguments:
2023-09-22 19:11:12.125 JVMEntryway: INFO: 0: /hail-jars/gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar
2023-09-22 19:11:12.125 JVMEntryway: INFO: 1: is.hail.backend.service.Main
2023-09-22 19:11:12.125 JVMEntryway: INFO: 2: /batch/fe537a243a3046d29d76861ffee94b92
2023-09-22 19:11:12.125 JVMEntryway: INFO: 3: /batch/fe537a243a3046d29d76861ffee94b92/log
2023-09-22 19:11:12.126 JVMEntryway: INFO: 4: gs://hail-query-ger0g/jars/b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar
2023-09-22 19:11:12.126 JVMEntryway: INFO: 5: worker
2023-09-22 19:11:12.126 JVMEntryway: INFO: 6: gs://1-day/parallelizeAndComputeWithIndex/O3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss=
2023-09-22 19:11:12.126 JVMEntryway: INFO: 7: 0
2023-09-22 19:11:12.126 JVMEntryway: INFO: 8: 5
2023-09-22 19:11:12.126 JVMEntryway: INFO: Yielding control to the QoB Job.
2023-09-22 19:11:12.131 Worker$: INFO: is.hail.backend.service.Worker b115f6a6ec23f111a4512b562b52d9f8a52ec41c
2023-09-22 19:11:12.131 Worker$: INFO: running job 0/5 at root gs://1-day/parallelizeAndComputeWithIndex/O3mcL5QoyfBBMz0eSi7uIjGQkV3FuD5vCON_8i4r0ss= with scratch directory '/batch/fe537a243a3046d29d76861ffee94b92'
2023-09-22 19:11:12.143 GoogleStorageFS$: INFO: Initializing google storage client from service account key
2023-09-22 19:11:12.456 WorkerTimer$: INFO: readInputs took 325.065544 ms.
2023-09-22 19:11:12.456 : INFO: RegionPool: initialized for thread 10: pool-2-thread-2
2023-09-22 19:11:12.481 GoogleStorageFS$: INFO: createNoCompression: gs://neale-bge/foo.ht/index/part-0-c7ba7549-bf68-42db-a8ef-0f1b13721c79.idx/index
2023-09-22 19:11:12.486 : INFO: RegionPool: REPORT_THRESHOLD: 257.0K allocated (129.0K blocks / 128.0K chunks), regions.size = 3, 0 current java objects, thread 10: pool-2-thread-2
2023-09-22 19:11:12.486 : INFO: RegionPool: REPORT_THRESHOLD: 577.0K allocated (193.0K blocks / 384.0K chunks), regions.size = 4, 0 current java objects, thread 10: pool-2-thread-2
2023-09-22 19:11:12.486 GoogleStorageFS$: INFO: createNoCompression: gs://neale-bge/foo.ht/rows/parts/part-0-c7ba7549-bf68-42db-a8ef-0f1b13721c79
2023-09-22 19:11:12.625 GoogleStorageFS$: INFO: close: gs://neale-bge/foo.ht/index/part-0-c7ba7549-bf68-42db-a8ef-0f1b13721c79.idx/index
2023-09-22 19:11:12.656 : INFO: TaskReport: stage=0, partition=0, attempt=0, peakBytes=656384, peakBytesReadable=641.00 KiB, chunks requested=4, cache hits=2
2023-09-22 19:11:12.656 : INFO: RegionPool: FREE: 641.0K allocated (257.0K blocks / 384.0K chunks), regions.size = 5, 0 current java objects, thread 10: pool-2-thread-2
2023-09-22 19:11:12.656 JVMEntryway: ERROR: QoB Job threw an exception.
java.lang.reflect.InvocationTargetException: null
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_382]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_382]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_382]
at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_382]
at is.hail.JVMEntryway$1.run(JVMEntryway.java:119) ~[jvm-entryway.jar:?]
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[?:1.8.0_382]
at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[?:1.8.0_382]
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[?:1.8.0_382]
at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[?:1.8.0_382]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) ~[?:1.8.0_382]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) ~[?:1.8.0_382]
at java.lang.Thread.run(Thread.java:750) ~[?:1.8.0_382]
Caused by: is.hail.relocated.com.google.cloud.storage.StorageException: 403 Forbidden
POST https://storage.googleapis.com/upload/storage/v1/b/neale-bge/o?name=foo.ht/index/part-0-c7ba7549-bf68-42db-a8ef-0f1b13721c79.idx/index&uploadType=resumable
{
"error": {
"code": 403,
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"errors": [
{
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"domain": "global",
"reason": "forbidden"
}
]
}
}
at is.hail.relocated.com.google.cloud.storage.StorageException.translate(StorageException.java:165) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.translate(HttpStorageRpc.java:298) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.open(HttpStorageRpc.java:1029) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.ResumableMedia.lambda$startUploadForBlobInfo$0(ResumableMedia.java:40) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at com.google.api.gax.retrying.DirectRetryingExecutor.submit(DirectRetryingExecutor.java:103) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.RetryHelper.run(RetryHelper.java:76) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.RetryHelper.runWithRetries(RetryHelper.java:50) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.Retrying.run(Retrying.java:65) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.ResumableMedia.lambda$startUploadForBlobInfo$1(ResumableMedia.java:34) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.StorageImpl.writer(StorageImpl.java:674) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.StorageImpl.writer(StorageImpl.java:95) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$2(GoogleStorageFS.scala:300) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.services.package$.retryTransientErrors(package.scala:182) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$1(GoogleStorageFS.scala:300) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$1$adapted(GoogleStorageFS.scala:299) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS.is$hail$io$fs$GoogleStorageFS$$handleRequesterPays(GoogleStorageFS.scala:181) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.doHandlingRequesterPays(GoogleStorageFS.scala:304) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.flush(GoogleStorageFS.scala:314) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at java.io.DataOutputStream.flush(DataOutputStream.java:123) ~[?:1.8.0_382]
at java.io.FilterOutputStream.close(FilterOutputStream.java:158) ~[?:1.8.0_382]
at is.hail.utils.richUtils.ByteTrackingOutputStream.close(ByteTrackingOutputStream.scala:23) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.index.IndexWriterUtils.close(IndexWriter.scala:225) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at __C30collect_distributed_array_table_native_writer.apply(Unknown Source) ~[?:?]
at __C30collect_distributed_array_table_native_writer.apply(Unknown Source) ~[?:?]
at is.hail.backend.BackendUtils.$anonfun$collectDArray$16(BackendUtils.scala:91) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.utils.package$.using(package.scala:637) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.annotations.RegionPool.scopedRegion(RegionPool.scala:162) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.BackendUtils.$anonfun$collectDArray$15(BackendUtils.scala:90) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$12(Worker.scala:167) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23) ~[scala-library-2.12.15.jar:?]
at is.hail.services.package$.retryTransientErrors(package.scala:182) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$11(Worker.scala:166) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$11$adapted(Worker.scala:164) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.utils.package$.using(package.scala:637) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.main(Worker.scala:164) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Main$.main(Main.scala:14) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Main.main(Main.scala) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
... 12 more
Suppressed: is.hail.relocated.com.google.cloud.storage.StorageException: 403 Forbidden
POST https://storage.googleapis.com/upload/storage/v1/b/neale-bge/o?name=foo.ht/index/part-0-c7ba7549-bf68-42db-a8ef-0f1b13721c79.idx/index&uploadType=resumable
{
"error": {
"code": 403,
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"errors": [
{
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"domain": "global",
"reason": "forbidden"
}
]
}
}
at is.hail.relocated.com.google.cloud.storage.StorageException.translate(StorageException.java:165) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.translate(HttpStorageRpc.java:298) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.open(HttpStorageRpc.java:1029) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.ResumableMedia.lambda$startUploadForBlobInfo$0(ResumableMedia.java:40) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at com.google.api.gax.retrying.DirectRetryingExecutor.submit(DirectRetryingExecutor.java:103) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.RetryHelper.run(RetryHelper.java:76) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.RetryHelper.runWithRetries(RetryHelper.java:50) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.Retrying.run(Retrying.java:65) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.ResumableMedia.lambda$startUploadForBlobInfo$1(ResumableMedia.java:34) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.StorageImpl.writer(StorageImpl.java:674) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.StorageImpl.writer(StorageImpl.java:95) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$2(GoogleStorageFS.scala:300) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.services.package$.retryTransientErrors(package.scala:182) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$1(GoogleStorageFS.scala:300) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$1$adapted(GoogleStorageFS.scala:299) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS.is$hail$io$fs$GoogleStorageFS$$handleRequesterPays(GoogleStorageFS.scala:181) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.doHandlingRequesterPays(GoogleStorageFS.scala:304) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$close$1(GoogleStorageFS.scala:326) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23) ~[scala-library-2.12.15.jar:?]
at is.hail.services.package$.retryTransientErrors(package.scala:182) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.close(GoogleStorageFS.scala:324) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at java.io.FilterOutputStream.close(FilterOutputStream.java:159) ~[?:1.8.0_382]
at is.hail.utils.richUtils.ByteTrackingOutputStream.close(ByteTrackingOutputStream.scala:23) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.index.IndexWriterUtils.close(IndexWriter.scala:225) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at __C30collect_distributed_array_table_native_writer.apply(Unknown Source) ~[?:?]
at __C30collect_distributed_array_table_native_writer.apply(Unknown Source) ~[?:?]
at is.hail.backend.BackendUtils.$anonfun$collectDArray$16(BackendUtils.scala:91) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.utils.package$.using(package.scala:637) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.annotations.RegionPool.scopedRegion(RegionPool.scala:162) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.BackendUtils.$anonfun$collectDArray$15(BackendUtils.scala:90) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$12(Worker.scala:167) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23) ~[scala-library-2.12.15.jar:?]
at is.hail.services.package$.retryTransientErrors(package.scala:182) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$11(Worker.scala:166) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$11$adapted(Worker.scala:164) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.utils.package$.using(package.scala:637) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.main(Worker.scala:164) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Main$.main(Main.scala:14) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Main.main(Main.scala) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_382]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_382]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_382]
at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_382]
at is.hail.JVMEntryway$1.run(JVMEntryway.java:119) ~[jvm-entryway.jar:?]
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[?:1.8.0_382]
at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[?:1.8.0_382]
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[?:1.8.0_382]
at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[?:1.8.0_382]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) ~[?:1.8.0_382]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) ~[?:1.8.0_382]
at java.lang.Thread.run(Thread.java:750) ~[?:1.8.0_382]
Caused by: com.google.api.client.http.HttpResponseException: 403 Forbidden
POST https://storage.googleapis.com/upload/storage/v1/b/neale-bge/o?name=foo.ht/index/part-0-c7ba7549-bf68-42db-a8ef-0f1b13721c79.idx/index&uploadType=resumable
{
"error": {
"code": 403,
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"errors": [
{
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"domain": "global",
"reason": "forbidden"
}
]
}
}
at com.google.api.client.http.HttpResponseException$Builder.build(HttpResponseException.java:293) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at com.google.api.client.http.HttpRequest.execute(HttpRequest.java:1118) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.open(HttpStorageRpc.java:1022) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
... 48 more
Caused by: com.google.api.client.http.HttpResponseException: 403 Forbidden
POST https://storage.googleapis.com/upload/storage/v1/b/neale-bge/o?name=foo.ht/index/part-0-c7ba7549-bf68-42db-a8ef-0f1b13721c79.idx/index&uploadType=resumable
{
"error": {
"code": 403,
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"errors": [
{
"message": "dking-ae4q6@hail-vdc.iam.gserviceaccount.com does not have storage.objects.create access to the Google Cloud Storage object. Permission 'storage.objects.create' denied on resource (or it may not exist).",
"domain": "global",
"reason": "forbidden"
}
]
}
}
at com.google.api.client.http.HttpResponseException$Builder.build(HttpResponseException.java:293) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at com.google.api.client.http.HttpRequest.execute(HttpRequest.java:1118) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.spi.v1.HttpStorageRpc.open(HttpStorageRpc.java:1022) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.ResumableMedia.lambda$startUploadForBlobInfo$0(ResumableMedia.java:40) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at com.google.api.gax.retrying.DirectRetryingExecutor.submit(DirectRetryingExecutor.java:103) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.RetryHelper.run(RetryHelper.java:76) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.RetryHelper.runWithRetries(RetryHelper.java:50) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.Retrying.run(Retrying.java:65) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.ResumableMedia.lambda$startUploadForBlobInfo$1(ResumableMedia.java:34) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.StorageImpl.writer(StorageImpl.java:674) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.relocated.com.google.cloud.storage.StorageImpl.writer(StorageImpl.java:95) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$2(GoogleStorageFS.scala:300) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.services.package$.retryTransientErrors(package.scala:182) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$1(GoogleStorageFS.scala:300) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.$anonfun$doHandlingRequesterPays$1$adapted(GoogleStorageFS.scala:299) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS.is$hail$io$fs$GoogleStorageFS$$handleRequesterPays(GoogleStorageFS.scala:181) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.doHandlingRequesterPays(GoogleStorageFS.scala:304) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.fs.GoogleStorageFS$$anon$2.flush(GoogleStorageFS.scala:314) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at java.io.DataOutputStream.flush(DataOutputStream.java:123) ~[?:1.8.0_382]
at java.io.FilterOutputStream.close(FilterOutputStream.java:158) ~[?:1.8.0_382]
at is.hail.utils.richUtils.ByteTrackingOutputStream.close(ByteTrackingOutputStream.scala:23) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.io.index.IndexWriterUtils.close(IndexWriter.scala:225) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at __C30collect_distributed_array_table_native_writer.apply(Unknown Source) ~[?:?]
at __C30collect_distributed_array_table_native_writer.apply(Unknown Source) ~[?:?]
at is.hail.backend.BackendUtils.$anonfun$collectDArray$16(BackendUtils.scala:91) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.utils.package$.using(package.scala:637) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.annotations.RegionPool.scopedRegion(RegionPool.scala:162) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.BackendUtils.$anonfun$collectDArray$15(BackendUtils.scala:90) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$12(Worker.scala:167) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23) ~[scala-library-2.12.15.jar:?]
at is.hail.services.package$.retryTransientErrors(package.scala:182) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$11(Worker.scala:166) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.$anonfun$main$11$adapted(Worker.scala:164) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.utils.package$.using(package.scala:637) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Worker$.main(Worker.scala:164) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Main$.main(Main.scala:14) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
at is.hail.backend.service.Main.main(Main.scala) ~[gs:__hail-query-ger0g_jars_b115f6a6ec23f111a4512b562b52d9f8a52ec41c.jar.jar:0.0.1-SNAPSHOT]
... 12 more
Version
0.2.124
Relevant log output
No response