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Fix behavior of entry_float_type flag in import_vcf #6378

merged 2 commits into from
Jun 19, 2019


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This PR fixes an issue in which the entry_float_type flag in import_vcf affects all floating-point fields in a VCF, including fields defined in INFO headers. We should have restricted it to affect only fields defined in FORMAT headers.

This is a rehash of #6262 due to some forked repo damage on our end.

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@tpoterba tpoterba left a comment

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Looks good, sorry for the hassle getting this in!

@danking danking merged commit 8903fdc into hail-is:master Jun 19, 2019
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Looks good, sorry for the hassle getting this in!

Thanks - no worries, I think we called git rebase one too many times on our side and got what we deserved...

@tmwong2003 tmwong2003 deleted the tmwong2003/fix-entry-float-type branch June 19, 2019 16:26
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3 participants