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When user wrongly specified --vcf_mode imputed but there is actually no DS field in VCF, the script will silently exit due to the KeyError exception in the generator at this line:
When user wrongly specified
--vcf_mode imputed
but there is actually no DS field in VCF, the script will silently exit due to theKeyError
exception in the generator at this line:MetaXcan/software/metax/genotype/CYVCF2Genotype.py
Line 61 in 122e5fd
In order to improve the error messaging, we need to handle the exception explicitly by raising up the error.
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