Updated verbatim replacement script. #805
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| # This is a definition file for GitHub CI. | |
| name: GitHub CI | |
| on: | |
| push: | |
| branches: [ master ] | |
| workflow_dispatch: | |
| jobs: | |
| static_checks_debian_stable_x86_64: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: debian:stable | |
| timeout-minutes: 60 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R . /dcma | |
| - name: install_dependencies | |
| run: | | |
| export DEBIAN_FRONTEND="noninteractive" | |
| apt-get update --yes | |
| apt-get install --yes --no-install-recommends coreutils binutils findutils grep sed | |
| - name: check_for_common_nonthreadsafe_nonreentrant_functions | |
| run: | | |
| ./scripts/perform_static_checks.sh | |
| build_cross_mxe_x86_64: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: "hdclark/dcma_build_base_mxe:latest" | |
| timeout-minutes: 120 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R ./docker/builders/mxe /scratch | |
| cp -R . /dcma | |
| ./scripts/enable_swapfile.sh | |
| - name: build | |
| run: | | |
| ( ( while true ; do sleep 225 ; printf '\n\n' ; df -h ; printf '\n\n' ; free || true ; printf '\n\n' ; done ) &) | |
| ./docker/builders/mxe/implementation_mxe.sh | |
| rsync -avP /out/ ./Windows/ | |
| strip ./Windows/usr/bin/*exe | |
| strip ./Windows/usr/lib/*a | |
| ( cd ./Windows/usr/bin/ && mv opengl32.dll opengl32_disabled.dll ) || true | |
| git config --global --add safe.directory '*' || true | |
| - name: test | |
| run: | | |
| export DEBIAN_FRONTEND='noninteractive' | |
| sed -i -e 's@stable@bullseye@g' /etc/apt/sources.list | |
| apt-get update --yes | |
| apt-get install --yes --no-install-recommends git ca-certificates rsync mesa-utils | |
| dpkg --add-architecture i386 | |
| apt-get update --yes | |
| apt-get install --yes wine32 wine64 | |
| mkdir -pv wine-conf-dir | |
| chown "$(id -u)":"$(id -g)" wine-conf-dir | |
| export WINEPREFIX="$(pwd)/wine-conf-dir/.wine-prefix" | |
| find ./Windows/usr/bin/ -type f -exec chmod 777 '{}' \; | |
| rsync -a ./Windows/ /opt/ | |
| echo '#!/bin/bash' > /usr/bin/dicomautomaton_dispatcher | |
| echo 'exec wine /opt/usr/bin/dicomautomaton_dispatcher.exe "$@"' >> /usr/bin/dicomautomaton_dispatcher | |
| chmod 777 /usr/bin/dicomautomaton_dispatcher | |
| dicomautomaton_dispatcher -h | |
| ./integration_tests/Run.sh -v | |
| - name: create_zip | |
| run: | | |
| export short_sha="$(git rev-parse --short HEAD || printf 'unknown')" | |
| export DEBIAN_FRONTEND="noninteractive" | |
| apt-get update --yes | |
| apt-get install --yes --no-install-recommends coreutils binutils findutils rsync openssh-client patchelf zip | |
| rm -rf ci_artifacts | |
| mkdir -pv ci_artifacts | |
| ( cd ./Windows/ && zip -r ../ci_artifacts/DICOMautomaton-latest-x86_64.zip . ) | |
| cp ci_artifacts/DICOMautomaton-latest-x86_64.zip "ci_artifacts/DICOMautomaton-${short_sha}-x86_64.zip" | |
| find ci_artifacts/ -iname '*.zip' -print -execdir bash -c 'sha256sum "$@" > "$@".sha256sum' bash '{}' \; | |
| - name: deploy_to_github | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: "DICOMautomaton-exes" | |
| if-no-files-found: error | |
| path: | | |
| ci_artifacts/DICOMautomaton-latest-x86_64.zip | |
| ci_artifacts/DICOMautomaton-latest-x86_64.zip.sha256sum | |
| - name: deploy_to_halclark_ca | |
| run: | | |
| echo "${{secrets.HALCLARKCA_DEPLOY_KEY}}" > deploy_key | |
| chmod 600 deploy_key | |
| for i in `seq 1 20` ; do sleep 5 ; rsync -avP -e 'ssh -v -i deploy_key -o ServerAliveInterval=30 -o ServerAliveCountMax=5 -o StrictHostKeyChecking=no' ci_artifacts/ root@halclark.ca:/var/www/html/ci/ && break ; done | |
| build_debian_buster_x86_64: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: debian:buster | |
| timeout-minutes: 120 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R ./docker/builders/ci /scratch | |
| cp -R . /dcma | |
| ./scripts/enable_swapfile.sh | |
| - name: build | |
| run: | | |
| ( ( while true ; do sleep 225 ; printf '\n\n' ; df -h ; printf '\n\n' ; free || true ; printf '\n\n' ; done ) &) | |
| ./docker/builders/ci/implementation_ci_debian_buster.sh | |
| git config --global --add safe.directory '*' || true | |
| - name: test | |
| run: | | |
| ./integration_tests/Run.sh -v | |
| - name: create_appimage | |
| run: | | |
| ./scripts/extract_system_appimage.sh | |
| export DEBIAN_FRONTEND="noninteractive" | |
| apt-get update --yes | |
| apt-get install --yes --no-install-recommends coreutils binutils findutils rsync openssh-client patchelf | |
| rm -rf ci_artifacts | |
| mkdir -pv ci_artifacts | |
| cp DICOMautomaton*AppImage DICOMautomaton-latest-x86_64.AppImage | |
| mv DICOMautomaton*AppImage ci_artifacts/ | |
| find ci_artifacts/ -iname '*AppImage' -print -execdir bash -c 'sha256sum "$@" > "$@".sha256sum' bash '{}' \; | |
| - name: deploy_to_github | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: "DICOMautomaton-AppImage" | |
| if-no-files-found: error | |
| path: | | |
| ci_artifacts/DICOMautomaton-latest-x86_64.AppImage | |
| ci_artifacts/DICOMautomaton-latest-x86_64.AppImage.sha256sum | |
| - name: deploy_to_halclark_ca | |
| run: | | |
| echo "${{secrets.HALCLARKCA_DEPLOY_KEY}}" > deploy_key | |
| chmod 600 deploy_key | |
| for i in `seq 1 20` ; do sleep 5 ; rsync -avP -e 'ssh -v -i deploy_key -o ServerAliveInterval=30 -o ServerAliveCountMax=5 -o StrictHostKeyChecking=no' ci_artifacts/ root@halclark.ca:/var/www/html/ci/ && break ; done | |
| build_debian_buster_aarch64: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: debian:buster | |
| timeout-minutes: 360 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R ./docker/builders/ci /scratch | |
| cp -R . /dcma | |
| ./scripts/enable_swapfile.sh | |
| - name: build | |
| run: | | |
| ( ( while true ; do sleep 225 ; printf '\n\n' ; df -h ; printf '\n\n' ; free || true ; printf '\n\n' ; done ) &) | |
| ./docker/build_bases/debian_buster/create_foreign_chroot.sh -d /debian_buster_aarch64 -s /run_in_chroot.sh -a arm64 | |
| cp -R /scratch /debian_buster_aarch64/scratch | |
| cp -R /dcma /debian_buster_aarch64/dcma | |
| /run_in_chroot.sh 'cd /dcma && ./docker/builders/ci/implementation_ci_debian_buster.sh' | |
| - name: test | |
| run: | | |
| /run_in_chroot.sh 'cd /dcma && ./integration_tests/Run.sh -v' | |
| - name: create_appimage | |
| run: | | |
| /run_in_chroot.sh 'cd /dcma && ./scripts/extract_system_appimage.sh' | |
| export DEBIAN_FRONTEND="noninteractive" | |
| apt-get update --yes | |
| apt-get install --yes --no-install-recommends coreutils binutils findutils rsync openssh-client patchelf | |
| rm -rf ci_artifacts | |
| mkdir -pv ci_artifacts | |
| cp /debian_buster_aarch64/dcma/DICOMautomaton*AppImage ci_artifacts/DICOMautomaton-latest-aarch64.AppImage | |
| mv /debian_buster_aarch64/dcma/DICOMautomaton*AppImage ci_artifacts/ | |
| find ci_artifacts/ -iname '*AppImage' -print -execdir bash -c 'sha256sum "$@" > "$@".sha256sum' bash '{}' \; | |
| - name: deploy_to_github | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: "DICOMautomaton-AppImage" | |
| if-no-files-found: error | |
| path: | | |
| ci_artifacts/DICOMautomaton-latest-aarch64.AppImage | |
| ci_artifacts/DICOMautomaton-latest-aarch64.AppImage.sha256sum | |
| - name: deploy_to_halclark_ca | |
| run: | | |
| echo "${{secrets.HALCLARKCA_DEPLOY_KEY}}" > deploy_key | |
| chmod 600 deploy_key | |
| for i in `seq 1 20` ; do sleep 5 ; rsync -avP -e 'ssh -v -i deploy_key -o ServerAliveInterval=30 -o ServerAliveCountMax=5 -o StrictHostKeyChecking=no' ci_artifacts/ root@halclark.ca:/var/www/html/ci/ && break ; done | |
| build_debian_buster_armhf: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: debian:buster | |
| timeout-minutes: 360 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R ./docker/builders/ci /scratch | |
| cp -R . /dcma | |
| ./scripts/enable_swapfile.sh | |
| - name: build | |
| run: | | |
| ( ( while true ; do sleep 225 ; printf '\n\n' ; df -h ; printf '\n\n' ; free || true ; printf '\n\n' ; done ) &) | |
| ./docker/build_bases/debian_buster/create_foreign_chroot.sh -d /debian_buster_armhf -s /run_in_chroot.sh -a armhf | |
| cp -R /scratch /debian_buster_armhf/scratch | |
| cp -R /dcma /debian_buster_armhf/dcma | |
| /run_in_chroot.sh 'cd /dcma && ./docker/builders/ci/implementation_ci_debian_buster.sh' | |
| - name: test | |
| run: | | |
| /run_in_chroot.sh 'cd /dcma && ./integration_tests/Run.sh -v' | |
| - name: create_appimage | |
| run: | | |
| /run_in_chroot.sh 'cd /dcma && ./scripts/extract_system_appimage.sh' | |
| export DEBIAN_FRONTEND="noninteractive" | |
| apt-get update --yes | |
| apt-get install --yes --no-install-recommends coreutils binutils findutils rsync openssh-client patchelf | |
| rm -rf ci_artifacts | |
| mkdir -pv ci_artifacts | |
| cp /debian_buster_armhf/dcma/DICOMautomaton*AppImage ci_artifacts/DICOMautomaton-latest-armhf.AppImage | |
| mv /debian_buster_armhf/dcma/DICOMautomaton*AppImage ci_artifacts/ | |
| find ci_artifacts/ -iname '*AppImage' -print -execdir bash -c 'sha256sum "$@" > "$@".sha256sum' bash '{}' \; | |
| - name: deploy_to_github | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: "DICOMautomaton-AppImage" | |
| if-no-files-found: error | |
| path: | | |
| ci_artifacts/DICOMautomaton-latest-armhf.AppImage | |
| ci_artifacts/DICOMautomaton-latest-armhf.AppImage.sha256sum | |
| - name: deploy_to_halclark_ca | |
| run: | | |
| echo "${{secrets.HALCLARKCA_DEPLOY_KEY}}" > deploy_key | |
| chmod 600 deploy_key | |
| for i in `seq 1 20` ; do sleep 5 ; rsync -avP -e 'ssh -v -i deploy_key -o ServerAliveInterval=30 -o ServerAliveCountMax=5 -o StrictHostKeyChecking=no' ci_artifacts/ root@halclark.ca:/var/www/html/ci/ && break ; done | |
| build_static_alpine_armv7: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 360 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R . ~/dcma | |
| export DEBIAN_FRONTEND="noninteractive" | |
| sudo apt-get update --yes | |
| sudo apt-get install --yes --no-install-recommends coreutils binutils findutils rsync openssh-client patchelf qemu binfmt-support qemu-user-static | |
| sudo ./docker/build_bases/alpine/setup_host.sh | |
| sudo ./scripts/enable_swapfile.sh | |
| - name: authenticate_with_dockerhub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_TOKEN }} | |
| - name: build | |
| run: | | |
| ( ( while true ; do sleep 225 ; printf '\n\n' ; df -h ; printf '\n\n' ; free || true ; printf '\n\n' ; done ) &) | |
| mkdir -pv ~/binaries/{bin,include,lib,share} | |
| cd ~/dcma/ | |
| sudo docker run \ | |
| --privileged \ | |
| --network=host \ | |
| --platform=linux/arm/v7 \ | |
| -v ~/dcma:/dcma:rw \ | |
| -v ~/binaries:/usr/local:rw \ | |
| -v ~/dcma/docker/build_bases/alpine:/build_base:rw \ | |
| -v ~/dcma/docker/builders/alpine:/scratch:rw \ | |
| 'hdclark/dicomautomaton_alpine_armv7' \ | |
| '/dcma/docker/builders/alpine/implementation_alpine.sh' | |
| sudo chown --recursive $USER:$USER ~/binaries | |
| - name: test | |
| run: | | |
| find ~/binaries/ -type f -execdir chmod 777 '{}' \; | |
| sudo cp ~/binaries/bin/dicomautomaton_dispatcher /usr/bin/ | |
| cd ~/dcma && ./integration_tests/Run.sh -v | |
| - name: gather_files | |
| run: | | |
| mkdir -pv ~/ci_artifacts/ | |
| cp ~/binaries/bin/dicomautomaton_dispatcher ~/ci_artifacts/DICOMautomaton-${GITHUB_SHA::8}-armv7.static | |
| cp ~/binaries/bin/dicomautomaton_dispatcher ~/ci_artifacts/DICOMautomaton-latest-armv7.static | |
| find ~/ci_artifacts/ -type f -iname '*static' -print -execdir bash -c 'sha256sum "$@" > "$@".sha256sum' bash '{}' \; | |
| - name: deploy_to_github | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: "DICOMautomaton-static" | |
| if-no-files-found: error | |
| path: | | |
| ~/ci_artifacts/DICOMautomaton-latest-armv7.static | |
| ~/ci_artifacts/DICOMautomaton-latest-armv7.static.sha256sum | |
| - name: deploy_to_halclark_ca | |
| run: | | |
| echo "${{secrets.HALCLARKCA_DEPLOY_KEY}}" > deploy_key | |
| chmod 600 deploy_key | |
| for i in `seq 1 20` ; do sleep 5 ; rsync -avP -e 'ssh -v -i deploy_key -o ServerAliveInterval=30 -o ServerAliveCountMax=5 -o StrictHostKeyChecking=no' ~/ci_artifacts/ root@halclark.ca:/var/www/html/ci/ && break ; done | |
| build_static_alpine_x86_64: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 360 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R . ~/dcma | |
| export DEBIAN_FRONTEND="noninteractive" | |
| sudo apt-get update --yes | |
| sudo apt-get install --yes --no-install-recommends coreutils binutils findutils rsync openssh-client patchelf qemu binfmt-support qemu-user-static | |
| sudo ./docker/build_bases/alpine/setup_host.sh | |
| sudo ./scripts/enable_swapfile.sh | |
| - name: authenticate_with_dockerhub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_TOKEN }} | |
| - name: build | |
| run: | | |
| ( ( while true ; do sleep 225 ; printf '\n\n' ; df -h ; printf '\n\n' ; free || true ; printf '\n\n' ; done ) &) | |
| mkdir -pv ~/binaries/{bin,include,lib,share} | |
| cd ~/dcma/ | |
| sudo docker run \ | |
| --privileged \ | |
| --network=host \ | |
| --platform=linux/amd64 \ | |
| -v ~/dcma:/dcma:rw \ | |
| -v ~/binaries:/usr/local:rw \ | |
| -v ~/dcma/docker/build_bases/alpine:/build_base:rw \ | |
| -v ~/dcma/docker/builders/alpine:/scratch:rw \ | |
| 'hdclark/dicomautomaton_alpine_x86_64' \ | |
| '/dcma/docker/builders/alpine/implementation_alpine.sh' | |
| sudo chown --recursive $USER:$USER ~/binaries | |
| - name: test | |
| run: | | |
| find ~/binaries/ -type f -execdir chmod 777 '{}' \; | |
| sudo cp ~/binaries/bin/dicomautomaton_dispatcher /usr/bin/ | |
| cd ~/dcma && ./integration_tests/Run.sh -v | |
| - name: gather_files | |
| run: | | |
| mkdir -pv ~/ci_artifacts/ | |
| cp ~/binaries/bin/dicomautomaton_dispatcher ~/ci_artifacts/DICOMautomaton-${GITHUB_SHA::8}-x86_64.static | |
| cp ~/binaries/bin/dicomautomaton_dispatcher ~/ci_artifacts/DICOMautomaton-latest-x86_64.static | |
| find ~/ci_artifacts/ -type f -iname '*static' -print -execdir bash -c 'sha256sum "$@" > "$@".sha256sum' bash '{}' \; | |
| - name: deploy_to_github | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: "DICOMautomaton-static" | |
| if-no-files-found: error | |
| path: | | |
| ~/ci_artifacts/DICOMautomaton-latest-x86_64.static | |
| ~/ci_artifacts/DICOMautomaton-latest-x86_64.static.sha256sum | |
| - name: deploy_to_halclark_ca | |
| run: | | |
| echo "${{secrets.HALCLARKCA_DEPLOY_KEY}}" > deploy_key | |
| chmod 600 deploy_key | |
| for i in `seq 1 20` ; do sleep 5 ; rsync -avP -e 'ssh -v -i deploy_key -o ServerAliveInterval=30 -o ServerAliveCountMax=5 -o StrictHostKeyChecking=no' ~/ci_artifacts/ root@halclark.ca:/var/www/html/ci/ && break ; done | |
| build_static_alpine_aarch64: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 360 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: prep | |
| run: | | |
| cp -R . ~/dcma | |
| export DEBIAN_FRONTEND="noninteractive" | |
| sudo apt-get update --yes | |
| sudo apt-get install --yes --no-install-recommends coreutils binutils findutils rsync openssh-client patchelf qemu binfmt-support qemu-user-static | |
| sudo ./docker/build_bases/alpine/setup_host.sh | |
| sudo ./scripts/enable_swapfile.sh | |
| - name: authenticate_with_dockerhub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_TOKEN }} | |
| - name: build | |
| run: | | |
| ( ( while true ; do sleep 225 ; printf '\n\n' ; df -h ; printf '\n\n' ; free || true ; printf '\n\n' ; done ) &) | |
| mkdir -pv ~/binaries/{bin,include,lib,share} | |
| cd ~/dcma/ | |
| sudo docker run \ | |
| --privileged \ | |
| --network=host \ | |
| --platform=linux/arm64 \ | |
| -v ~/dcma:/dcma:rw \ | |
| -v ~/binaries:/usr/local:rw \ | |
| -v ~/dcma/docker/build_bases/alpine:/build_base:rw \ | |
| -v ~/dcma/docker/builders/alpine:/scratch:rw \ | |
| 'hdclark/dicomautomaton_alpine_aarch64' \ | |
| '/dcma/docker/builders/alpine/implementation_alpine.sh' | |
| sudo chown --recursive $USER:$USER ~/binaries | |
| - name: test | |
| run: | | |
| find ~/binaries/ -type f -execdir chmod 777 '{}' \; | |
| sudo cp ~/binaries/bin/dicomautomaton_dispatcher /usr/bin/ | |
| cd ~/dcma && ./integration_tests/Run.sh -v | |
| - name: gather_files | |
| run: | | |
| mkdir -pv ~/ci_artifacts/ | |
| cp ~/binaries/bin/dicomautomaton_dispatcher ~/ci_artifacts/DICOMautomaton-${GITHUB_SHA::8}-aarch64.static | |
| cp ~/binaries/bin/dicomautomaton_dispatcher ~/ci_artifacts/DICOMautomaton-latest-aarch64.static | |
| find ~/ci_artifacts/ -type f -iname '*static' -print -execdir bash -c 'sha256sum "$@" > "$@".sha256sum' bash '{}' \; | |
| - name: deploy_to_github | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: "DICOMautomaton-static" | |
| if-no-files-found: error | |
| path: | | |
| ~/ci_artifacts/DICOMautomaton-latest-aarch64.static | |
| ~/ci_artifacts/DICOMautomaton-latest-aarch64.static.sha256sum | |
| - name: deploy_to_halclark_ca | |
| run: | | |
| echo "${{secrets.HALCLARKCA_DEPLOY_KEY}}" > deploy_key | |
| chmod 600 deploy_key | |
| for i in `seq 1 20` ; do sleep 5 ; rsync -avP -e 'ssh -v -i deploy_key -o ServerAliveInterval=30 -o ServerAliveCountMax=5 -o StrictHostKeyChecking=no' ~/ci_artifacts/ root@halclark.ca:/var/www/html/ci/ && break ; done | |