Issues: hdmf-dev/hdmf-zarr
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[Feature]: Explore use of Zarrita
category: proposal
proposed enhancements or new features
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Bug]: Zarr 2.18.0 with Blosc
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
#192
opened May 8, 2024 by
CodyCBakerPhD
3 tasks done
[Feature]: Use proposed enhancements or new features
priority: medium
non-critical problem and/or affecting only a small set of users
topic: ZarrIO
Feature request related to the ZarrIO backend
copy_store
for copying existing zarr data
category: proposal
Zarr datasets info lack compression data
category: bug
errors in the code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
#186
opened Apr 26, 2024 by
h-mayorquin
[Bug]: Remote read with/without consolidated metadata is not being tested
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
topic: testing
issues related to testing
#185
opened Apr 26, 2024 by
oruebel
3 tasks done
[Bug]: NWBZarrIO appending
category: bug
errors in the code or code behavior
priority: high
impacts proper operation or use of feature important to most users
topic: storage
issues related to storage schema and formats
[Feature]: Support pathlib.Path in ZarrIO
category: bug
errors in the code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Bug]: errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
topic: storage
issues related to storage schema and formats
export
fails to correctly save units after adding columns
category: bug
[Feature]: write proposed enhancements or new features
priority: medium
non-critical problem and/or affecting only a small set of users
topic: storage
issues related to storage schema and formats
xarray
-compatible Zarr files
category: proposal
[Feature]: Write zarr without using pickle
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Feature]: Refactor tox.ini to match HDMF
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
#169
opened Feb 22, 2024 by
mavaylon1
3 tasks done
[Feature]: Test without consolidate metadata
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
#148
opened Dec 12, 2023 by
mavaylon1
3 tasks done
[Bug]: Extension namespaces not exported from HDF5 NWB
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Bug]: reading unit table arrays via string keys much slower than reading as properties
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Documentation]: Add tutorial for S3 streaming
priority: medium
non-critical problem and/or affecting only a small set of users
topic: docs
Issues related to documentation
[Feature]: Expose improvements of code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
mode
to NWBZarrIO
category: enhancement
#137
opened Nov 7, 2023 by
CodyCBakerPhD
3 tasks done
[Feature]: Create an example NWB Zarr dataset
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Feature]: Prevent Write on Containers with custom names
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Bug]: Cannot overwrite existing HDF5 .nwb file with mode="w"
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
topic: storage
issues related to storage schema and formats
[Feature]: Support parallelization for export
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
topic: storage
issues related to storage schema and formats
[Bug]: Min req tests failing on errors in the code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
topic: testing
issues related to testing
import zarr
category: bug
#98
opened Jun 18, 2023 by
rly
3 tasks done
[Documentation]: favicon
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
topic: docs
Issues related to documentation
Add support for ruff and the other modern tooling that is now in HDMF
category: enhancement
improvements of code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
#91
opened May 16, 2023 by
mavaylon1
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