Bump actions/checkout from 3 to 4 (#979)

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

.github/workflows/check_external_links.yml

@@ -15,7 +15,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version

.github/workflows/codespell.yml

@@ -14,6 +14,6 @@ jobs:
 
     steps:
       - name: Checkout
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
       - name: Codespell
         uses: codespell-project/actions-codespell@v2

.github/workflows/deploy_release.yml

@@ -10,7 +10,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repo with submodules
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version

.github/workflows/ruff.yml

@@ -5,5 +5,5 @@ jobs:
   ruff:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: chartboost/ruff-action@v1

.github/workflows/run_all_tests.yml

@@ -50,7 +50,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version
@@ -112,7 +112,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version
@@ -156,7 +156,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version
@@ -216,7 +216,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
 

.github/workflows/run_coverage.yml

@@ -36,7 +36,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version

.github/workflows/run_hdmf_zarr_tests.yml

@@ -15,7 +15,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version

.github/workflows/run_pynwb_tests.yml

@@ -15,7 +15,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version

.github/workflows/run_tests.yml

@@ -34,7 +34,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version
@@ -95,7 +95,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
 
@@ -133,7 +133,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'
           fetch-depth: 0  # tags are required for versioneer to determine the version
@@ -186,7 +186,7 @@ jobs:
           access_token: ${{ github.token }}
 
       - name: Checkout repo with submodules
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           submodules: 'recursive'
 
@@ -231,7 +231,7 @@ jobs:
           all_but_latest: true
           access_token: ${{ github.token }}
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           submodules: 'recursive'