SetupTasksMacosSierra

Documenting a clean install on macOS Sierra with Anaconda and Homebrew.

Install Xcode from the App Store and run it once to accept the license.

Install Homebrew http://brew.sh

Install Conda https://www.continuum.io/downloads

Install main code dependencies:

brew tap homebrew/science
brew install wget
brew install cmake
brew install open-mpi
brew install boost --c++11
brew install tinyxml
brew install ctemplate
brew install cppunit
brew install parmetis
brew install fabric

(WIP) Install setup tool dependencies

brew install cgal --c++11

VMTK can now be installed via Anaconda!

conda create -n $foo -c vmtk itk vtk vmtk cython swig pyyaml wxpython
. activate $foo

You can then install hemeTools and setuptool into this environment either for production or development

For dev:

cd $HEMELB/Tools
pip install -e .
cd $HEMELB/Tools/setuptool
cmake .
pip install -e .

Note the cmake is needed to configure setup.cfg

For production omit the -e flags