Scripts for figures and analysis for the preprint: Henningsen EC, Lewis D, Nazareno E, Mangelson H, Sanchez M, Langford K, Huang Y-F, Steffenson BJ, Boesen B, Kianian SF, Liachko I, Stone E, Dodds PN, Sperschneider J, Figueroa M. 2024. A high- resolution haplotype pangenome uncovers somatic hybridization, recombination and intercontinental migration in oat crown rust. bioRxiv. doi: https://doi.org/10.1101/2024.03.27.583983
Scripts and relevant data are arranged by what figure they were used for.