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Can't run example code #1

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jfbeltran opened this issue Oct 13, 2016 · 5 comments
Closed

Can't run example code #1

jfbeltran opened this issue Oct 13, 2016 · 5 comments
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@jfbeltran
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Hi, we've cloned the repo on two separate machines and get the same error when trying to run the example code.

$ ls
README.md     SMILESSim.jar data          source code

$ dirtree
   |-data
   |---e
   |---gpcr
   |---ic
   |---nr
   |---sim_matrix

$ java -jar SMILESSim.jar
---------edit------------------
---------e------------------
Exception in thread "main" java.lang.NullPointerException
    at ioops.readSMILES.readSMILESfromFolder(readSMILES.java:24)
    at smileskernels.SMILESKernels.main(SMILESKernels.java:72)
@hkmztrk
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hkmztrk commented Oct 13, 2016

Hello,

Thanks for your feedback.
I just downloaded and run it on Windows8 just fine. Are you by chance running it on Linux machine? If so, path seperator might be the cause. I'll look into it and update jar accordingly.

@hkmztrk hkmztrk self-assigned this Oct 13, 2016
@jfbeltran
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Hey,

That's exactly right one was a Mac and the other one a Linux machine. Would
really appreciate the fix, thank you!

Juan

On Thu, Oct 13, 2016 at 5:40 PM, hkmztrk notifications@github.com wrote:

Hello,

Thanks for your feedback.
I just downloaded and run it on Windows8 just fine. Are you by chance
running it on Linux machine? If so, path seperator might be the cause. I'll
look into it and update jar accordingly.


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Juan Felipe Beltran

@hkmztrk
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hkmztrk commented Oct 13, 2016

Hello,
I updated jar and tested it on Ubuntu - it worked fine. Could you please confirm if it works?

@jfbeltran
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It works now! Thanks for the quick response!

On Thu, Oct 13, 2016 at 6:10 PM, hkmztrk notifications@github.com wrote:

Hello,
I updated jar and tested it on Ubuntu - it worked fine. Could you please
confirm it if works?


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Juan Felipe Beltran

@hkmztrk
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hkmztrk commented Oct 14, 2016

Great! You're welcome!

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