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new parameter --rna, closes #163 #165

Merged
merged 5 commits into from
Jan 29, 2022
Merged

new parameter --rna, closes #163 #165

merged 5 commits into from
Jan 29, 2022

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fischer-hub
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  • added new pipeline parameter --rna to activate directRNA mode for ONT transcriptome assembly with rattle
  • added documentation for --rna in help message and README
  • fixed a typo in README
  • updated busco DB lineage (v5) overview link in help message and README

@fischer-hub fischer-hub added documentation Improvements or additions to documentation enhancement New feature or request labels Jan 12, 2022
@fischer-hub fischer-hub linked an issue Jan 12, 2022 that may be closed by this pull request
@hoelzer hoelzer changed the base branch from smr_long_read_fix to master January 29, 2022 13:15
README.md Outdated
@@ -312,9 +312,10 @@ Nextflow will need access to the working directory where temporary calculations
### Transcriptome assembly

```bash
--assemly # switch to transcriptome assemly
--assembly # switch to transcriptome assemlby
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hehe, by fixing the typo you introduced another @fischer-hub ;) Se the second "assemlby" ;)

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besides, looks all fine, please feel free to merge! thx!

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whoops :D

@hoelzer
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hoelzer commented Jan 29, 2022

Nice, looks all good, I merge!

@hoelzer hoelzer merged commit a3f6f18 into master Jan 29, 2022
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Rattle ONT assembly cDNA vs dRNA
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