The repo contains experiments I have done for BioMed Varna.
BioMed Varna is an initiative that brings together Researchers and Students from Varna Free University "Chernorizets Hrabur", University of Medicine - Varna Medical and students from high schools in the city. The joint activity consists of working in interdisciplinary research groups on research and applied projects.
- Distances
- experiment with Mahalanobis distance calculation
- the dataset used is a set of Haralick features generated by QuPath from a medical image of brain scan.
- Haralick features confusion matrices
- two sets of confusion matrices are built
- data are automatic annotations and expert annotations..
- Bio Process Mining
- contains the code and initial analysis performed for the article A Concept of Bio-process Mining Applied to Time-Resolved Developmental Dataset of the Roundworm C. elegans, publication date: Oct 10, 2020, BioInfoMed 2020 International Symposium on Bioinformatics and Biomedicine, Oct 8th - 10th, 2020, Bourgas, Bulgaria