- SPARC heart scaffold fitted to HuBMAP CCF Heart reference organs
- HuBMAP CCF Tissue Block registrations mapped to SPARC scaffold registrations
- A bi-directional process for mapping HuBMAP CCF RUI registrations to SPARC scaffold registrations (code)
- Revised Heart ASCT+B Table: data demo
- Documentation: Overview (source), Scaffold Conversion, Registration Conversion
20220907_ccf-sparc-pilot-demo.mp4
| Deliverable or Milestone | Due Date | Status | Links |
|---|---|---|---|
| Y2.701.1 First release of SPARC-HuBMAP cardiac scaffold | 3/31/2022 | Complete | docs demo data |
| Y2.702: Ensure interoperability between 3D SPARC scaffolds and HuBMAP reference organs, starting with heart |
6/30/2022 | Complete | code docs demo data |
| Y2.703: Ensure resource metadata interoperability, which is requisite to facilitate HuBMAP-SPARC cross platform querying | 9/23/2022 | Complete | ASCT+B data ASCT+B demo |
| Y2.704: Share spatially registered, biomolecular RNAseq data for sampling sites for the heart | 9/23/2022 | Complete | demo data (registrations) RNAseq data ASCT+B data ASCT+B demo |