GWAS pipeline

Date: April 2020

Last updated: 22/04/2020

Authors: Manuela Tan

General description and purpose

Steps for running a basic linear or logistic regression model GWAS in plink or rvtests. pipeline for running a GWAS. This covers:

Thank you to the Laboratory of Neurogenetics group at NIH. This GWAS pipeline is largely built on their steps.

https://github.com/neurogenetics/GWAS-pipeline