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hyjkim edited this page Nov 22, 2013 · 3 revisions

Welcome to the immunobrowser wiki!

Overview

Installation

Documentation

Django

For Django documentation, please see the app's internal admin docs.

Javascript

Inserting data

Junctional Analysis with miTCR

miTCR is a java-based tool that converts raw sequencing data into error-corrected, VDJ-called data.

java -Xmx5g -jar mitcr.jar -level 2 -pset flex $INPUT $OUTPUT