Skip to content

Commit

Permalink
Merge pull request #2863 from nem1234/debug_dm_axes
Browse files Browse the repository at this point in the history
bugfix: broken axis name when signal_type==""
  • Loading branch information
ericpre committed Dec 21, 2021
2 parents 97687bf + 5c4e9e5 commit 55b56ff
Show file tree
Hide file tree
Showing 2 changed files with 7 additions and 1 deletion.
3 changes: 2 additions & 1 deletion hyperspy/io_plugins/digital_micrograph.py
Original file line number Diff line number Diff line change
Expand Up @@ -536,13 +536,14 @@ def units(self):
def names(self):
names = [t.Undefined] * len(self.shape)
indices = list(range(len(self.shape)))

if self.signal_type == "EELS":
if "eV" in self.units:
names[indices.pop(self.units.index("eV"))] = "Energy loss"
elif self.signal_type in ("EDS", "EDX"):
if "keV" in self.units:
names[indices.pop(self.units.index("keV"))] = "Energy"
elif self.signal_type in ("CL"):
elif self.signal_type == "CL":
if "nm" in self.units:
names[indices.pop(self.units.index("nm"))] = "Wavelength"
for index, name in zip(indices[::-1], ("x", "y", "z")):
Expand Down
5 changes: 5 additions & 0 deletions hyperspy/tests/io/test_dm3.py
Original file line number Diff line number Diff line change
Expand Up @@ -489,3 +489,8 @@ def test_data(pdict):
err_msg='content %s type % i: '
'\n%s not equal to \n%s' %
(subfolder, key, str(s.data), str(dat)))

def test_axes_bug_for_image():
fname = os.path.join(MY_PATH, "dm3_2D_data", "test_STEM_image.dm3")
s = load(fname)
assert s.axes_manager[1].name == 'y'

0 comments on commit 55b56ff

Please sign in to comment.