Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Enhancement of NeXus file IO #2725

Merged
merged 22 commits into from Jun 2, 2021
Merged

Enhancement of NeXus file IO #2725

merged 22 commits into from Jun 2, 2021

Commits on Mar 26, 2021

  1. Limited the axes list to be the same or smaller than keys from dataset

    @ptim0626
    ptim0626 committed Mar 26, 2021
    Configuration menu
    Copy the full SHA
    21a47ab View commit details
    Browse the repository at this point in the history

  2. Set correct chunks by info from signal axes for lazy data

    @ptim0626
    ptim0626 committed Mar 26, 2021
    Configuration menu
    Copy the full SHA
    f210a38 View commit details
    Browse the repository at this point in the history

  3. Load related hdf dataset with correct dimension and chunks 

    Refactored getting nav_list out the _nexus_dataset_to_signal function.
    @ptim0626
    ptim0626 committed Mar 26, 2021
    Configuration menu
    Copy the full SHA
    7d9a731 View commit details
    Browse the repository at this point in the history

Commits on Apr 6, 2021

  1. Allowed writing hyperspy signal into NeXus file

    @ptim0626
    ptim0626 committed Apr 6, 2021
    Configuration menu
    Copy the full SHA
    0608c91 View commit details
    Browse the repository at this point in the history

  2. Saved NXdata with correct chunks and checked units

    @ptim0626
    ptim0626 committed Apr 6, 2021
    Configuration menu
    Copy the full SHA
    3309855 View commit details
    Browse the repository at this point in the history

Commits on Apr 7, 2021

  1. Skipped duplicated metadata groups when writing

    @ptim0626
    ptim0626 committed Apr 7, 2021
    Configuration menu
    Copy the full SHA
    e077c6f View commit details
    Browse the repository at this point in the history

Commits on Apr 27, 2021

  1. Added support for reading specific dataset by absolute data path

    @ptim0626
    ptim0626 committed Apr 27, 2021
    Configuration menu
    Copy the full SHA
    0e89e4e View commit details
    Browse the repository at this point in the history

Commits on Apr 28, 2021

  1. Added option to avoid loading array metadata

    @ptim0626
    ptim0626 committed Apr 28, 2021
    Configuration menu
    Copy the full SHA
    9c258ba View commit details
    Browse the repository at this point in the history

Commits on Apr 29, 2021

  1. Fixed missing fclose and added new implemented option in read_metadat… 

    …a_from_file
    @ptim0626
    ptim0626 committed Apr 29, 2021
    Configuration menu
    Copy the full SHA
    9a1c8d4 View commit details
    Browse the repository at this point in the history

  2. Added option to skip saving certain original metadata keys

    @ptim0626
    ptim0626 committed Apr 29, 2021
    Configuration menu
    Copy the full SHA
    1e5d65e View commit details
    Browse the repository at this point in the history

  3. Merge branch 'RELEASE_next_minor' into nexus_reader_improvement

    @ptim0626
    ptim0626 committed Apr 29, 2021
    Configuration menu
    Copy the full SHA
    7c6565b View commit details
    Browse the repository at this point in the history

Commits on Apr 30, 2021

  1. Checked all elements in _check_search_keys are str

    @ptim0626
    ptim0626 committed Apr 30, 2021
    Configuration menu
    Copy the full SHA
    cc7de2f View commit details
    Browse the repository at this point in the history

  2. Handled metadata as dictionary when writing

    @ptim0626
    ptim0626 committed Apr 30, 2021
    Configuration menu
    Copy the full SHA
    ad66893 View commit details
    Browse the repository at this point in the history

  3. Added tests for new features 

    Also added tests for previously uncovered codes.
    @ptim0626
    ptim0626 committed Apr 30, 2021
    Configuration menu
    Copy the full SHA
    0f7ff34 View commit details
    Browse the repository at this point in the history

Commits on May 4, 2021

  1. Added more tests

    @ptim0626
    ptim0626 committed May 4, 2021
    Configuration menu
    Copy the full SHA
    1d42f83 View commit details
    Browse the repository at this point in the history

Commits on May 5, 2021

  1. Handled IO of HyperSpy signal class as metadata

    @ptim0626
    ptim0626 committed May 5, 2021
    Configuration menu
    Copy the full SHA
    60e2505 View commit details
    Browse the repository at this point in the history

Commits on May 6, 2021

  1. Updated relevant part of user guide

    @ptim0626
    ptim0626 committed May 6, 2021
    Configuration menu
    Copy the full SHA
    0a4466c View commit details
    Browse the repository at this point in the history

  2. Updated CHANGES.rst

    @ptim0626
    ptim0626 committed May 6, 2021
    Configuration menu
    Copy the full SHA
    92ff84a View commit details
    Browse the repository at this point in the history

Commits on May 27, 2021

  1. Updated user guide to show difference of dataset_keys and dataset_paths

    @ptim0626
    ptim0626 committed May 27, 2021
    Configuration menu
    Copy the full SHA
    d9cc3cf View commit details
    Browse the repository at this point in the history

  2. Moved the change to towncrier

    @ptim0626
    ptim0626 committed May 27, 2021
    Configuration menu
    Copy the full SHA
    1cb4ff3 View commit details
    Browse the repository at this point in the history

  3. Merge branch 'RELEASE_next_minor' into nexus_reader_improvement

    @ptim0626
    ptim0626 committed May 27, 2021
    Configuration menu
    Copy the full SHA
    b19417b View commit details
    Browse the repository at this point in the history

Commits on Jun 1, 2021

  1. Deprecated plural arguments in NeXuS IO

    @ptim0626
    ptim0626 committed Jun 1, 2021
    Configuration menu
    Copy the full SHA
    2a206a5 View commit details
    Browse the repository at this point in the history