Add reader for hamamatsu .img format #718
Workflow file for this run
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| name: Docs | |
| on: [push, pull_request] | |
| jobs: | |
| build_doc_PR: | |
| # This build is to automatically add comments on PR | |
| name: PR comments | |
| runs-on: ubuntu-latest | |
| env: | |
| BUILD_DEPS: python3-dev build-essential graphviz | |
| LATEX_DEPS: dvipng latexmk texlive-latex-recommended texlive-latex-extra texlive-fonts-recommended | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: ericpre/sphinx-action@latest_sphinx | |
| with: | |
| pre-build-command: "apt-get update -y && apt-get install -y ${{ env.BUILD_DEPS }} ${{ env.LATEX_DEPS }} && pip install .'[all, docs]'" | |
| build-command: make html | |
| docs-folder: docs/ | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| path: ./docs/_build/html/ | |
| name: docs_build | |
| build_docs: | |
| # This build is to check links and update table of supported formats | |
| name: Check links and update table | |
| runs-on: ubuntu-latest | |
| env: | |
| DOCS_PATH: ./docs/_build/html/ | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v4 | |
| name: Install Python | |
| with: | |
| python-version: '3.10' | |
| - name: Install build docs | |
| shell: bash -l {0} | |
| run: | | |
| pip install .'[all, docs]' | |
| - name: Update packages list | |
| shell: bash -l {0} | |
| run: | | |
| # python generate_supported_format_table.py | |
| echo "Table of Supported Format" | |
| echo "=========================" | |
| cat ./docs/supported_formats/supported_formats.rst | |
| - name: Check links | |
| shell: bash -l {0} | |
| run: | | |
| cd docs | |
| make linkcheck | |
| - name: Build docs | |
| shell: bash -l {0} | |
| run: | | |
| cd docs | |
| make SPHINXOPTS="-W --keep-going" html | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| path: ${{ env.DOCS_PATH }} | |
| name: docs_html | |
| push_docs: | |
| # This build is to push changes to gh-pages branch (https://hyperspy.org/rosettasciio) | |
| needs: build_docs | |
| name: Push to gh-pages | |
| runs-on: ubuntu-latest | |
| if: ${{ github.event_name != 'pull_request' && github.repository == 'hyperspy/rosettasciio' }} | |
| permissions: | |
| # needs write permission to push the docs to gh-pages | |
| contents: write | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| ref: gh-pages | |
| - uses: actions/download-artifact@v3 | |
| with: | |
| name: docs_html | |
| path: . | |
| - name: list files | |
| run: | | |
| ls | |
| - name: Git status | |
| run: | | |
| git status | |
| git status -s | |
| if [[ $(git status -s) ]]; then | |
| HAS_CHANGES='true' | |
| else | |
| HAS_CHANGES='false' | |
| fi | |
| echo "HAS_CHANGES=${HAS_CHANGES}" >> $GITHUB_ENV | |
| - name: Commit files | |
| # Skip when there is nothing to commit | |
| if: ${{ env.HAS_CHANGES == 'true' }} | |
| run: | | |
| git config --local user.email "github-actions[bot]@users.noreply.github.com" | |
| git config --local user.name "github-actions[bot]" | |
| git add -A | |
| git commit -m "Update docs build" -a | |
| - name: Push changes | |
| if: ${{ env.HAS_CHANGES == 'true' }} | |
| uses: ad-m/github-push-action@9a2e3c14aaecf56d5816dc3a54514f82050820b2 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| branch: gh-pages |