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Contains open-source services for the osparc simcore platform

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osparc-services

Collection of some open-source services for the osparc simcore platform:

master Requirements Status

Continuous integration

Continuous integration

Available services [27]

name description type latest version build status
3d-viewer Paraview Web-based Visualizer dynamic
3d-viewer-gpu Paraview Web-based Visualizer dynamic
cardiac_myocyte_grandi This is the mouse cardiac myocyte electrophysiology model from Eleonora Grandi at UC Davis. computational
0D cardiac model viewer Graph viewer for data generated by Rabbit SS and Human GB 0D cardiac models dynamic 0D cardiac model viewer
1D cardiac model viewer Graph viewer for data generated by Rabbit SS and Human GB 1D cardiac models dynamic 1D cardiac model viewer
2D cardiac model viewer Graph viewer for data generated by Rabbit SS and Human GB 2D cardiac models dynamic 2D cardiac model viewer
CSV Table viewer CSV Table viewer powered by csv-to-html-table dynamic CSV Table viewer
httpbin Used to boot in legacy mode dynamic httpbin
httpbin-dynamic-sidecar Boot with dynamic-sidecar using service key and version dynamic
httpbin-dynamic-sidecar-compose Boot with dynamic-sidecar via docker-compose spec dynamic
jupyter-base-notebook Jupyter notebook dynamic
jupyter-neuron Jupyter notebook with preinstalled neuron modules dynamic
jupyter-r-notebook Jupyter R notebook dynamic
jupyter-scipy-notebook Jupyter scipy notebook dynamic
kember-viewer Graph viewer for data generated by kember solver dynamic
Mapcore Flatmap Interactive maps reveal the anatomy and functional relationships of the autonomic nerves and the organs that they innervate. 2D and 3D maps render spatial dynamics, connectivity, and physiology across a range of species and nerve-organ systems. dynamic Mapcore Flatmap
mattward-viewer Graph viewer for data generated by mattward solver dynamic mattward-viewer
OpenCOR OpenCOR is a cross-platform modelling environment, which can be used to organise, edit, simulate and analyse CellML and SED-ML files. computational OpenCOR
opencorservice_demo opencorservice_demo computational
pmr_mrg Creates a simulation of the MRG fiber based on the model found on the PMR https://models.physiomeproject.org/e/5f7/mcintyre_richardson_grill_model_2001.cellml/view computational
2D plot 2D plots powered by RAW Graphs dynamic
Table view Table view powered by RAW Graphs dynamic
modeler Modeler viewer dynamic
sleeper A service which awaits for time to pass, two times. computational sleeper
sleeper-gpu A service which awaits for time to pass. computational
sleeper-mpi A service which awaits for time to pass. computational
Tissue properties Tissue properties compiled in an extensive, critical literature review by the ITIS Foundation. Visit itis.swiss/database for additional information, e.g., on tissue parameter variability/uncertainty, quality assurance, and the explored sources. Please use the following citation when referring to the database: Hasgall PA, Di Gennaro F, Baumgartner C, Neufeld E, Lloyd B, Gosselin MC, Payne D, Klingenböck A, Kuster N, ITIS Database for thermal and electromagnetic parameters of biological tissues, Version 4.0, May 15, 2018, DOI: 10.13099/VIP21000-04-0. itis.swiss/database. Powered by csv-to-html-table dynamic Tissue properties
Updated on 2021-05-06T09:17:39Z

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