Harmony v1.2 #218
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Harmony v1.2 #218
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pati-ni
commented
Nov 8, 2023
pati-ni
commented
- Major performance enhancements, using indexes for the regression
- update_R - Generate blocks correctly Simple harmony call fails on v1.1.0 #214
- lambda optimization - Lambda as a function of E.
- New alpha parameter to estimate lambda during runtime
- fail-safe for < 40 cells dataset . Setting block_size=0.2. Refuse to run with < 6 cells.
- added progress bar for the integration step.
When more cells exist the objective becomes larger while the convergence criterion remains fixed. That makes code slower in bigger datasets where iterations happen until all cells have stabilized.
New API is not using this
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