Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Describe how to use ELK to process Snomed before import #4560

Closed
reckart opened this issue Feb 25, 2024 · 0 comments
Closed

Describe how to use ELK to process Snomed before import #4560

reckart opened this issue Feb 25, 2024 · 0 comments
Assignees
@reckart
Labels
⭐️ Enhancement New feature or request Module: Knowledge Base
Projects
Kanban
Milestone
31.2

Comments

@reckart
Copy link
Member

reckart commented Feb 25, 2024

Is your feature request related to a problem? Please describe.
When loading the Snomed OFN file into INCEpTION, certain concepts with multiple parents do not appear in the concept tree.

Describe the solution you'd like
Describe a process using the ELK reasoner to generate subClassOf statements from the OWL axioms in the ontology. INCEpTION can then properly locate the concepts in the concept tree.
@reckart reckart added this to the 31.2 milestone Feb 25, 2024
@reckart reckart self-assigned this Feb 25, 2024
@reckart reckart added this to 🔖 To do in Kanban via automation Feb 25, 2024
reckart added a commit that referenced this issue Feb 25, 2024
@reckart
#4560 - Describe how to use ELK to process Snomed before import
6748f9a 
- Add recommendation to use ELK to generate missing statements and to enable the read-only mode
@reckart reckart closed this as completed Feb 26, 2024
reckart added a commit that referenced this issue Feb 26, 2024
@reckart
Merge pull request #4561 from inception-project/feature/4560-Describe…
45d35e9 
…-how-to-use-ELK-to-process-Snomed-before-import

#4560 - Describe how to use ELK to process Snomed before import
Kanban automation moved this from 🔖 To do to 🍹 Done Feb 26, 2024
reckart added a commit that referenced this issue Feb 26, 2024
@reckart
Merge branch 'release/31.x'
3b19c9f 
* release/31.x:
  #4560 - Describe how to use ELK to process Snomed before import

% Conflicts:
%	inception/inception-kb/src/main/resources/de/tudarmstadt/ukp/inception/kb/yaml/knowledgebase-profiles.yaml
reckart added a commit that referenced this issue Feb 26, 2024
@reckart
Merge branch 'main' into refactoring/4558-Better-verification-for-fea…
4bc22f3 
…ture-names

* main:
  #4560 - Describe how to use ELK to process Snomed before import
  #4513 - Support full text search in knowledge bases running on Blazegraph
  #4550 - Clean up code
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@reckart reckart

Labels
⭐️ Enhancement New feature or request Module: Knowledge Base
Projects
Kanban
  
🍹 Done
Milestone
31.2
Development

No branches or pull requests
1 participant
@reckart